Arabidopsis lyrata (lyrate rockcress): 9323710
Help
Entry
9323710 CDS
T01578
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1
KO
K14172
light-harvesting complex II chlorophyll a/b binding protein 7
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00196
Photosynthesis - antenna proteins
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
9323710
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
aly00194
]
9323710
Photosynthesis proteins [BR:
aly00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
9323710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chloroa_b-bind
DUF2391
Motif
Other DBs
NCBI-GeneID:
9323710
NCBI-ProteinID:
XP_020891566
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MALLFQEKLSSSLSSSYSSFHSLQRIYVPEPPRSRIAVTRSRSICRASWQELAGVLVFSA
IPFTAVKAIANSSLGESLRRRLEEKKKEAVENSSRFKAKAQEARNDSKWYGKERPRWFGP
IPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVLDL
TGAFHFAEPVWWRVGYSKLQGETLDYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYARYC
GIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQ
AAFTGKGPVQNLVDHVSDPLHNNLLAMLQT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctctgttgtttcaggagaagctttcatcatcactttcctcaagttattcgtcattt
cattctcttcagaggatatacgtgccggagcctcctcgtagtagaatcgctgtgacaagg
tcccgttcgatttgcagagcttcgtggcaagagctcgccggagtgttggttttctcggcg
attccgttcacggcggttaaagcaatcgcaaacagctcgctaggcgaatctttacggcgg
agattggaagagaaaaagaaggaagccgtggagaattcttcaagattcaaggctaaagcc
caggaagctagaaacgacagcaagtggtatggaaaagaacgtccccgttggtttggtcca
atcccatatgactatcctccataccttacaggagaacttccaggggattatggatttgac
attgcaggacttggcaaggatcgtttgacctttgataagtacttcaactttgaaatactt
catgctcgttgggccatgcttgcagcattgggtgctctaatcccagaagtattggatctc
acaggagctttccattttgctgaacccgtatggtggcgagtcggttactcgaagcttcag
ggagagacgttggactacctcggcattccagggcttcacgtagctggaagccaaggtgtc
attgtaattgccatatgccaagtactcttgatggtaggaccggaatatgcaagatactgt
ggcattgaggccttagagccactgggaatatacttgccaggagacattaactatcctgga
gggacgctttttgatcccttgaacctctccgaagaccccgtagcttttgaagatcttaag
gttaaagagattaaaaacggacgattggcgatggtggcgtggcttggattttatgcacag
gctgctttcactggaaaaggtcctgtacaaaatcttgttgaccatgtctctgatccatta
cataacaatctgcttgccatgcttcagacatga
DBGET
integrated database retrieval system
