Arabidopsis lyrata (lyrate rockcress): 9323840
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Entry
9323840 CDS
T01578
Name
(RefSeq) YTH domain-containing family protein 2 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9323840
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
9323840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
DUF3942
Motif
Other DBs
NCBI-GeneID:
9323840
NCBI-ProteinID:
XP_020891291
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MTSHVPKHPRKSIEDMVKNLKVDPLAKVTASTTSMVSAKENKNQSEPSYYETLETYQGLP
CPYGGYYGFYYPGLDGSVGEVKDNGYYGYGTEVQYPVLQGENGSLIYLMPGFQSYDASQT
YMPISPVGVSSQALHSPMYAAQGYYQNQFGYGDVASPTYLWDPVGDKYVYGVASNTPPLK
QNISSSSHNHNNYYSKSKNSFTGHGMGDRPKTPRKNSYAPLPLHNQERGRIAYPMDPVKK
KSGALNRDETEKAKARNKENGNSVNDLANGQNHITNGECESCSLDAEGNERSNGVGSVIR
RDQYNLTSFQTKYEEAIFFVIKSYSEDDIHKSIKYNVWSSTLNGNKKLDSAYQESQKRIA
DKSGKCPVFLFFSVNASGQFCGVAEMMGRVDYEKSMEFWQQDKWTGYFPVKWHIIKDVPN
PQLRHIILENNENKPVTNSRDTQEVRLPQGNEVLNIFKNYAAKTSILDDFDFYENREKVM
VQKKLRFPPVLKKKEEDLVADFKTMAISNTVEGNTELPGTVN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcatgttccaaaacatcctcgtaaatccattgaagatatggtgaagaatctt
aaagtggatcctcttgctaaggtcactgcctccaccacttccatggtttctgcaaaagag
aataagaatcagtcagagccatcatattatgaaactctggagacatatcaaggcctgcct
tgtccttatggaggctactatggattctactatccaggtcttgatggttcagttggtgaa
gtaaaggataatggatactatggttatggaacagaagttcagtacccggttctgcaagga
gaaaatggatctttgatctacttgatgccagggtttcaatcttatgatgctagtcaaact
tatatgcctataagcccggttggtgtatcgagtcaagcacttcattcgccgatgtatgca
gctcaaggttattatcagaaccaatttggttatggagacgttgcatcaccgacctattta
tgggaccctgttggagacaagtatgtgtatggtgttgcttcaaataccccacccttgaaa
cagaacatatcttcttcaagtcataatcacaacaattattactcgaagagcaagaactcc
ttcacgggtcacggcatgggagatcgtcctaaaacaccgcgaaaaaacagctatgctcca
ctcccactgcataaccaagaaagaggtcgcattgcttacccgatggacccggtaaagaaa
aagtctggagctttaaatcgggatgaaacagagaaggcgaaagcgaggaacaaagaaaat
ggtaatagcgtaaatgacttagcaaacggtcaaaatcatattaccaatggagaatgtgaa
tcttgttcgttggatgctgaagggaatgaaagaagtaacggtgttggttctgtgatcaga
agggatcaatataacctcaccagctttcagaccaaatacgaggaagcaatcttttttgtg
ataaaatcgtatagcgaagacgacatacacaagagcatcaagtacaatgtctggtctagt
actctcaatgggaacaagaagttagatagtgcatatcaagaatctcagaagaggattgca
gacaaaagtggaaagtgcccggttttcctattcttctcggtgaatgcaagtggccaattc
tgcggtgtagctgagatgatgggacgagttgattatgagaaaagcatggagttctggcaa
caagataagtggactggctattttccggtcaagtggcacatcatcaaagatgttccaaat
ccgcaattacgacatatcatactagagaacaatgagaacaagcctgttaccaatagcaga
gacacacaagaggtgaggttgccacaagggaatgaagtgttgaacatcttcaagaactat
gcagcaaagacatctatattagatgattttgatttttatgaaaacagagagaaggttatg
gtacagaagaagctaaggttccctccggtattaaagaagaaagaagaagacttggttgct
gattttaaaacaatggcgatatctaatacagtcgagggaaacacagagttaccggggaca
gtgaactaa
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integrated database retrieval system
