Arabidopsis lyrata (lyrate rockcress): 9323898
Help
Entry
9323898 CDS
T01578
Name
(RefSeq) katanin p60 ATPase-containing subunit A1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aly04812
]
9323898
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
9323898
Cytoskeleton proteins [BR:
aly04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
9323898
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_33
TIP49
Mg_chelatase
AAA_22
AAA_16
AAA_28
AAA_14
IstB_IS21
RNA_helicase
AAA_17
PhoH
AAA_7
TsaE
NPHP3_N
nSTAND3
Parvo_NS1
AAA_24
Motif
Other DBs
NCBI-GeneID:
9323898
NCBI-ProteinID:
XP_002887834
UniProt:
D7KX67
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MVGSSNSLAGLQDHLKLAREYALEGSYDTSVIFFDGAIAQINKHLNTLDDPLARTKWMNV
KKAIMEETEVVKQLDAERRAFKEAPTGRRAASPPINTKSSFVFQPLDEYPTSSAAPMDDP
DVWRPPTRDVSSRRPARPGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKSTAGAR
SSTAGKKGAASKSTKAESMNGDAEDGKSKRGLYEGPDEDLAAMLERDVLDSTPGVRWDDV
AGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFF
NVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRVKS
ELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRKAL
ININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSK
DDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHEKWLSEFGSA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtagtagtaattcgttggcgggtctacaagatcacttgaaattagcgagagaa
tacgcactagaaggatcctatgacacatctgtcatcttcttcgatggcgccattgctcag
atcaacaagcatttaaacacccttgacgatcctttggcccggactaaatggatgaacgtt
aaaaaagccataatggaagagacggaagttgttaagcaattggatgcagagaggagagca
tttaaagaagctcccactggccgtcgcgctgcttctccgcctatcaataccaaatcatcc
tttgtttttcagcccttggatgagtatccaacttcatccgctgctcctatggatgatcct
gatgtgtggaggcctcctacccgtgatgtttctagtagaagacccgccaggcctggtcaa
actggtaccagaaaatcacctcaagatggggcttgggctcgtggccctacaacacgaaca
ggtccagcttcccgtggtggaagaggtggggctactagtaagtcaactgcaggtgcccgc
tcttccactgccggtaagaagggagctgcctcaaaatctaccaaggcagagtctatgaat
ggtgatgctgaagacgggaagtcaaaacggggattgtatgagggacctgatgaggacctg
gctgctatgcttgaaagggatgtgttggactcaactcctggtgtccgttgggatgatgtt
gcaggtttgtctgaagccaaaaggctgcttgaggaggcagttgtccttcctttatggatg
cccgaatactttcagggtattcgaagaccatggaaaggagttctcatgtttggtcctcct
gggacaggtaaaaccctgttggcaaaagcagttgcaaccgagtgtggtaccaccttcttc
aacgtctcttctgctacattagcttcaaaatggcgtggagagagtgagcgcatggtcaga
tgcctgtttgatctggctagggcatatgctccaagtacaatttttattgatgagattgac
tctctctgcaattctcgggggggttctggagagcatgaatcgtcaagaagggtgaaatcg
gaactcctagttcaagtagatggagtgagcaatacagcgacaaatgaagacggtagtcgc
aaaatagtaatggtactggcagctaccaacttcccatgggacatagatgaagctctcagg
aggaggctggaaaaacgtatatatatcccacttccagattttgaaagtcgtaaggcactt
atcaatatcaatctgagaacagttgaggtggcgagtgatgttaatattgaagatgtggcc
cggagaacggaagggtacagtggagacgatctgactaacgtgtgcagggacgcctcaatg
aacgggatgaggcgtaagatagcagggaaaacgagggatgagataaagaacatgtcgaaa
gacgatatatcaaatgatcctgtggctatgtgtgatttcgaagaggccattaggaaagtg
caaccgagtgtgtcttcctctgatattgagaaacacgagaagtggctctctgagtttgga
tctgcttaa
DBGET
integrated database retrieval system
