Arabidopsis lyrata (lyrate rockcress): 9323938
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Entry
9323938 CDS
T01578
Name
(RefSeq) ABC transporter F family member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
aly03012
]
9323938
Translation factors [BR:
aly03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
9323938
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_15
AAA
AAA_29
ORC-CDC6-like
NACHT
DUF5906
RsgA_GTPase
ATP-synt_ab
AAA_23
ZnuA
Motif
Other DBs
NCBI-GeneID:
9323938
NCBI-ProteinID:
XP_020891133
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MTEVASSVVYEVLGRRAQDVDEPIMDYIINVLADEDFDFGEEGEGAFDAVGELLVAAECV
SDFDECRLVCSKLSDKFGKHGLVKPTPTVRSLAMPVRMNDGMDDGPVKKKKPEPVDGPLL
TERDLAKIERRKKKDDRQRELQYQQHVAEMEAAKAGMPTVSVNHDTGGGSAIRDIHMDNF
NVSVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRYMAMHAIEGIPTNCQILHVEQE
VVGDKTTALQCVLNTDIERTKLLEEEIQILAKQREMEEPTAKDGLPTKDTVEGDLMSQRL
EEIYKRLDAIDAYTAEARAASILAGLSFTPEMQLKATNTFSGGWRMRIALARALFIEPDL
LLLDEPTNHLDLHAVLWLETYLTKWPKTFIVVSHAREFLNTVVTDIIHLQNQKLSTYKGN
YDIFERTREEQVKNQQKAFESSERSRSHMQAFIDKFRYNAKRASLVQSRIKALDRLAHVD
QVINDPDYKFEFPTPDDKPGPPIISFSDASFGYPGGPLLFRNLNFGIDLDSRIAMVGPNG
IGKSTILKLISGDLQPSSGTVFRSAKVRVAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQ
KLRSHLGSLGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHLLLLDEPSNHLDLDAVEA
LIQGLVLFQGGICMVSHDEHLISGSVDELWVVSDGRIAPFHGTFHDYKKLLQSST
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagttgcgagctcggtggtgtatgaagtgctcggacgcagagctcaggatgtg
gacgagccgattatggactacatcatcaatgtcctcgctgatgaagatttcgacttcggt
gaggaaggtgaaggtgcctttgatgccgtcggtgagctcctcgtcgctgctgaatgcgtt
tccgatttcgacgagtgccgtttggtttgtagcaaactgtcggataagtttggaaagcat
gggctggtgaagcctacaccaactgtgaggagtcttgcaatgcctgtgcggatgaacgat
ggaatggatgatggaccggtgaagaagaagaagccggagcctgtggatggccctttgctc
actgaacgtgacttagctaagattgaaaggagaaagaaaaaggatgatcgccaaagagag
ctacaatatcaacagcatgttgctgaaatggaagccgctaaagcagggatgcctactgtt
agtgtcaatcatgacactggtggtggctctgctatcagagatattcatatggataacttt
aatgtttctgttggaggccgtgacctgattgtcgatggatcaatcaccctctcttttgga
cgccattacggtcttgtaggacgtaatggtaccgggaaaacaacttttttgaggtatatg
gctatgcatgctatagagggtattcctactaattgccagatattgcatgtcgaacaagaa
gtggttggtgacaagacaacagccttacaatgcgttcttaacactgatattgaaagaacc
aagctgctggaagaagaaattcaaatactggcaaagcagagagaaatggaagaacccaca
gctaaggatggattgcctaccaaagacacagttgaaggagatcttatgtctcaaaggctt
gaagaaatatacaaaaggcttgacgcaattgatgcttatactgccgaggctcgggcagct
agtatccttgctggtctaagtttcactccagaaatgcagctgaaagctacaaatactttt
tcaggaggatggaggatgcgaattgcacttgctcgtgcactatttatagagcctgatttg
ttgttgcttgatgaacctacgaaccatcttgatctccatgctgtcttatggttagaaaca
tatctaacgaagtggccaaaaacatttatagtcgtttcccatgctagggaattcttgaac
acggtggtcacggacatcatccatttgcaaaaccaaaaactaagtacctataagggaaat
tatgatatttttgaaagaacacgggaagaacaagtgaaaaatcaacaaaaagcttttgaa
tcaagtgaacgatcacggtcacatatgcaggcgttcattgacaaatttcgttacaatgca
aagagggcgtctcttgttcagtcaagaatcaaggcattggaccgactggctcatgtggat
caagttattaatgatcctgactataaatttgaattcccaactcctgacgataagccagga
cctcccattatcagttttagtgatgcatcatttggctaccctggtggtccgttgttgttt
aggaacctaaatttcggaatagatctggacagccgtatcgcaatggtgggaccgaatggt
attggtaaatcaacaatactcaaacttatttctggggatctgcaaccaagctctggaaca
gttttccgttctgctaaggttcgagttgcagtctttagtcagcaccatgtggatggacta
gacctttcttcgaatcctcttctatatatgatgcgctgctacccaggagtaccggaacaa
aagctcagaagtcacttgggttctcttggggtcactggaaatcttgcactgcagcccatg
tacactttatcaggtggtcagaaaagcagagttgcatttgcgaagataacattcaagaaa
ccacacttgctattgcttgatgagccgtccaatcatcttgatttggatgctgtggaagct
ttgattcaaggacttgtcttattccaaggcggtatctgcatggtaagtcacgacgagcat
ctgatatcgggaagtgtggacgagttgtgggttgtgtcagacggtaggattgcaccattc
catggaaccttccatgactacaagaaacttctccaatcttcaacttaa
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