KEGG   Arabidopsis lyrata (lyrate rockcress): 9324000
Entry
9324000           CDS       T01578                                 
Name
(RefSeq) nucleolar protein 6
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    9324000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aly03009]
    9324000
Ribosome biogenesis [BR:aly03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    9324000
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D3 Nrap Nrap_D2 Nrap_D6
Other DBs
NCBI-GeneID: 9324000
NCBI-ProteinID: XP_020891515
LinkDB
Position
Unknown
AA seq 1049 aa
MEADTKTDSRTLKVNDLLKDVRLDYDSLSKLVGDAVSSIKEAIDGIPEDFKVTSELAPNF
VKDIGADKVDFSFKKPNGFSLCGSYSICGMAKPDTCVDLLVHLPKECFYEKDYMNHRYHA
KRCLYLCVIEKHLLSSSSIEKVVWSTLQNEARKPVLVVFPAKKVDQFPGFSIRIIPSATS
LFSVAKLSMSRNNVRSVTADGVPEPTPTYNSSILEDMFLEENSELLKKTFSEWKELGDAL
ILLKIWARQRSSIYVHDCLNGFLISVILSYLATHAKINKALNALDIFRVTLDFIATSKLW
ERGLYLPPQSEIRVSKEEKMQFRELFPVVICDSSTFVNLAFRMTSVGFQELQDEASLMLK
CMEKLRDGGFEEIFMTKIDYPVKYDHCIRLQLKGKTAVSMSGFCLDKECWRLYEQKVHSL
LLEGLGDRAKSIRVVWRNTNQDWHVESGLSVLDREPLFIGISVSSTEKAYRTVDIGPDAE
NKIEALRFRKFWGEKSDLRRFKDGRIAESTVWETQQWTKHLIMKQIVEYILKRHLSLSSD
DIVQLVDQLDFSLDYGGKDPISLSGNLLQAYEVLSKCLREIEGIPLKVSSVQPLDSALRF
TSVFPPEPHPVACEKIDSRRLQKLLPSCIPAMEVMIQLEGSGNWPMDDLAVEKTKSAFLL
KIAESLQNVKGIPCTATEDNVDVFMGGYAFRLRILHERGLSLVKREIGVDPVKHVSSTDK
MLFIRSQHASMINGLQGRFPIYAPVARLAKRWVSAHLFSGCLAEEAIELLVAHVFLTPLP
LGVPCSRINGFLRFLRLLADYDWMFYPLIVDINNDFGRNDEKEINDNFMSSRKGYEEDRQ
NISSAMFLAAPYDKASEAWTATSPNLLEQKRLVAYARSSANVLSKLVLQEHNDSVRWECL
FRTPLHNYDAVILLHRDKLPYPRRLLFPSELNQGKHVARGKASRLFNPFMPPGDLKRSHE
ELKNKLMVDFEPTKCLLSGLQEEFGTLKPWYDHIGGDAIGLTWNKHNSKKRERDEEEEES
NPMEMLKAVGEMGKGLVRDIYLLKPPRFV
NT seq 3150 nt   +upstreamnt  +downstreamnt
atggaggcagatactaagacagactctcgtactctgaaagttaacgacttgttaaaagac
gttcgcttagattacgattctctcagcaagcttgtcggtgatgccgtttcgtcgattaaa
gaagctattgatggaatccctgaagattttaaggttacctcggagttagctcctaatttt
gttaaggatattggggcggataaagtggacttcagttttaagaagccaaatggtttcagt
ctctgtggaagttactccatttgtggcatggcgaagccggatacttgtgttgatcttctt
gttcacttgcctaaggaatgtttttatgagaaggattacatgaatcatagataccatgcc
aaaagatgtctttatctttgtgttattgaaaagcatttgttgtcgtcatcgtccatcgag
aaggttgtatggtcaaccttacagaacgaagccagaaagccagtcctagttgtttttcca
gctaagaaagttgatcagtttcctggattttccataaggataatcccttcagcaacatcg
ctgtttagtgttgcaaagttgagtatgagcagaaacaacgtccgttctgtgactgcagat
ggtgtccctgagcccacaccaacttacaactcaagcatattggaggatatgtttctggag
gaaaattctgagcttctcaagaaaaccttctctgagtggaaggagttaggcgatgctttg
attttactgaagatatgggcaagacaaaggagctcgatatacgtccatgattgcctgaac
ggatttctaatctctgtgatactttcataccttgcaacccatgccaaaattaacaaggca
ctaaacgcattggatatattcagagtgacattggatttcatagccacttctaaattatgg
gagaggggtttatatcttccgccacagagtgaaattcgtgtctcgaaggaggagaagatg
cagttcagagagttgttccctgttgttatatgtgattcatctacatttgtgaatttggct
ttccggatgaccagtgttggattccaggagctccaagatgaggcttctttgatgcttaaa
tgtatggagaaactcagagatggaggattcgaggagatttttatgactaagattgactat
cctgttaagtatgaccactgcataaggttacagctcaaagggaaaacagcagtgtctatg
tcagggttttgtttggacaaggagtgttggagactctatgagcagaaagtgcatagcctg
ctgctagaaggactgggtgacagagcaaaatcaatccgtgttgtttggagaaataccaat
caagattggcatgtagagagtggcttgtcagttcttgacagagaacctcttttcattggc
atatctgtcagctccactgaaaaggcttatagaacagttgatattgggccagatgctgaa
aacaagatagaggcacttagattccggaagttttggggcgagaagtctgatctaaggagg
tttaaagatggaagaatagcggaaagcacagtttgggagactcagcagtggaccaaacat
cttatcatgaaacaaattgttgaatatatccttaagcggcatctttccctgtcatccgat
gacattgtacaattagtggatcaacttgatttctctctagactatgggggcaaagaccca
atatctttatctggaaatttgcttcaagcctatgaagttttatcgaagtgcttgcgtgag
attgaaggaatacctctcaaagtctctagcgtccagcctttagattcagctctaaggttc
acatccgtattccctcctgaacctcacccagtggcttgcgaaaaaatcgattcgcgaaga
ttgcaaaaacttttgccatcctgcattccagcaatggaggtcatgattcagctagagggt
tctggtaactggcccatggatgatttggcagttgagaaaacaaaatctgccttcctcctg
aaaattgcagagagccttcagaacgtcaagggaataccatgcacagctactgaggataat
gtcgatgttttcatgggtggttacgcatttcgcctgagaatattgcatgaaagaggcctg
agcttggtgaagagagaaattggagtggacccggtgaagcatgtttcctctaccgataaa
atgctttttattcgtagtcaacatgcaagtatgatcaatggtttgcaaggtcgatttcct
atatacgcaccagttgccaggcttgcaaaaagatgggtttctgcacatctcttttctggt
tgcctggcagaagaggccattgaacttttggttgctcatgtcttcctcacacctctccca
cttggtgttccttgctcccgaattaatggattcttaaggttcttgcgattactagcagac
tatgactggatgttctacccgttgattgttgacataaacaatgactttggtagaaatgac
gagaaagagatcaatgataatttcatgtcaagtagaaaaggctacgaagaggacagacaa
aacataagttcagctatgttcttggctgctccttacgacaaggcatcagaggcatggaca
gcaacttcaccaaatttattggaacaaaaaaggttggtggcttatgctcgaagcagtgca
aacgtgttgagcaaattggtattgcaagaacataacgattctgttcgatgggagtgcctt
ttcaggacacccttgcacaactatgacgcagttattcttctccacagagacaaattacct
tatccacgtcgtcttctgtttccatctgaacttaaccaagggaagcatgtagcacgggga
aaagcgagtagattgtttaacccatttatgccgcctggagatttgaagagaagccatgaa
gagcttaagaataagctaatggtggactttgagccgaccaagtgcttgttgagtgggttg
caggaagagtttgggacgttgaagccgtggtatgatcatataggaggtgacgcaattggt
ttaacatggaacaaacacaattcaaagaaacgagaacgagatgaagaggaagaagaaagt
aatccaatggagatgttgaaggcggtaggcgaaatgggtaaagggttggtaagggatatc
tatttgctcaagcctccacgctttgtctaa

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