Arabidopsis lyrata (lyrate rockcress): 9324000
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Entry
9324000 CDS
T01578
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9324000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9324000
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
9324000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
9324000
NCBI-ProteinID:
XP_020891515
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MEADTKTDSRTLKVNDLLKDVRLDYDSLSKLVGDAVSSIKEAIDGIPEDFKVTSELAPNF
VKDIGADKVDFSFKKPNGFSLCGSYSICGMAKPDTCVDLLVHLPKECFYEKDYMNHRYHA
KRCLYLCVIEKHLLSSSSIEKVVWSTLQNEARKPVLVVFPAKKVDQFPGFSIRIIPSATS
LFSVAKLSMSRNNVRSVTADGVPEPTPTYNSSILEDMFLEENSELLKKTFSEWKELGDAL
ILLKIWARQRSSIYVHDCLNGFLISVILSYLATHAKINKALNALDIFRVTLDFIATSKLW
ERGLYLPPQSEIRVSKEEKMQFRELFPVVICDSSTFVNLAFRMTSVGFQELQDEASLMLK
CMEKLRDGGFEEIFMTKIDYPVKYDHCIRLQLKGKTAVSMSGFCLDKECWRLYEQKVHSL
LLEGLGDRAKSIRVVWRNTNQDWHVESGLSVLDREPLFIGISVSSTEKAYRTVDIGPDAE
NKIEALRFRKFWGEKSDLRRFKDGRIAESTVWETQQWTKHLIMKQIVEYILKRHLSLSSD
DIVQLVDQLDFSLDYGGKDPISLSGNLLQAYEVLSKCLREIEGIPLKVSSVQPLDSALRF
TSVFPPEPHPVACEKIDSRRLQKLLPSCIPAMEVMIQLEGSGNWPMDDLAVEKTKSAFLL
KIAESLQNVKGIPCTATEDNVDVFMGGYAFRLRILHERGLSLVKREIGVDPVKHVSSTDK
MLFIRSQHASMINGLQGRFPIYAPVARLAKRWVSAHLFSGCLAEEAIELLVAHVFLTPLP
LGVPCSRINGFLRFLRLLADYDWMFYPLIVDINNDFGRNDEKEINDNFMSSRKGYEEDRQ
NISSAMFLAAPYDKASEAWTATSPNLLEQKRLVAYARSSANVLSKLVLQEHNDSVRWECL
FRTPLHNYDAVILLHRDKLPYPRRLLFPSELNQGKHVARGKASRLFNPFMPPGDLKRSHE
ELKNKLMVDFEPTKCLLSGLQEEFGTLKPWYDHIGGDAIGLTWNKHNSKKRERDEEEEES
NPMEMLKAVGEMGKGLVRDIYLLKPPRFV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagatactaagacagactctcgtactctgaaagttaacgacttgttaaaagac
gttcgcttagattacgattctctcagcaagcttgtcggtgatgccgtttcgtcgattaaa
gaagctattgatggaatccctgaagattttaaggttacctcggagttagctcctaatttt
gttaaggatattggggcggataaagtggacttcagttttaagaagccaaatggtttcagt
ctctgtggaagttactccatttgtggcatggcgaagccggatacttgtgttgatcttctt
gttcacttgcctaaggaatgtttttatgagaaggattacatgaatcatagataccatgcc
aaaagatgtctttatctttgtgttattgaaaagcatttgttgtcgtcatcgtccatcgag
aaggttgtatggtcaaccttacagaacgaagccagaaagccagtcctagttgtttttcca
gctaagaaagttgatcagtttcctggattttccataaggataatcccttcagcaacatcg
ctgtttagtgttgcaaagttgagtatgagcagaaacaacgtccgttctgtgactgcagat
ggtgtccctgagcccacaccaacttacaactcaagcatattggaggatatgtttctggag
gaaaattctgagcttctcaagaaaaccttctctgagtggaaggagttaggcgatgctttg
attttactgaagatatgggcaagacaaaggagctcgatatacgtccatgattgcctgaac
ggatttctaatctctgtgatactttcataccttgcaacccatgccaaaattaacaaggca
ctaaacgcattggatatattcagagtgacattggatttcatagccacttctaaattatgg
gagaggggtttatatcttccgccacagagtgaaattcgtgtctcgaaggaggagaagatg
cagttcagagagttgttccctgttgttatatgtgattcatctacatttgtgaatttggct
ttccggatgaccagtgttggattccaggagctccaagatgaggcttctttgatgcttaaa
tgtatggagaaactcagagatggaggattcgaggagatttttatgactaagattgactat
cctgttaagtatgaccactgcataaggttacagctcaaagggaaaacagcagtgtctatg
tcagggttttgtttggacaaggagtgttggagactctatgagcagaaagtgcatagcctg
ctgctagaaggactgggtgacagagcaaaatcaatccgtgttgtttggagaaataccaat
caagattggcatgtagagagtggcttgtcagttcttgacagagaacctcttttcattggc
atatctgtcagctccactgaaaaggcttatagaacagttgatattgggccagatgctgaa
aacaagatagaggcacttagattccggaagttttggggcgagaagtctgatctaaggagg
tttaaagatggaagaatagcggaaagcacagtttgggagactcagcagtggaccaaacat
cttatcatgaaacaaattgttgaatatatccttaagcggcatctttccctgtcatccgat
gacattgtacaattagtggatcaacttgatttctctctagactatgggggcaaagaccca
atatctttatctggaaatttgcttcaagcctatgaagttttatcgaagtgcttgcgtgag
attgaaggaatacctctcaaagtctctagcgtccagcctttagattcagctctaaggttc
acatccgtattccctcctgaacctcacccagtggcttgcgaaaaaatcgattcgcgaaga
ttgcaaaaacttttgccatcctgcattccagcaatggaggtcatgattcagctagagggt
tctggtaactggcccatggatgatttggcagttgagaaaacaaaatctgccttcctcctg
aaaattgcagagagccttcagaacgtcaagggaataccatgcacagctactgaggataat
gtcgatgttttcatgggtggttacgcatttcgcctgagaatattgcatgaaagaggcctg
agcttggtgaagagagaaattggagtggacccggtgaagcatgtttcctctaccgataaa
atgctttttattcgtagtcaacatgcaagtatgatcaatggtttgcaaggtcgatttcct
atatacgcaccagttgccaggcttgcaaaaagatgggtttctgcacatctcttttctggt
tgcctggcagaagaggccattgaacttttggttgctcatgtcttcctcacacctctccca
cttggtgttccttgctcccgaattaatggattcttaaggttcttgcgattactagcagac
tatgactggatgttctacccgttgattgttgacataaacaatgactttggtagaaatgac
gagaaagagatcaatgataatttcatgtcaagtagaaaaggctacgaagaggacagacaa
aacataagttcagctatgttcttggctgctccttacgacaaggcatcagaggcatggaca
gcaacttcaccaaatttattggaacaaaaaaggttggtggcttatgctcgaagcagtgca
aacgtgttgagcaaattggtattgcaagaacataacgattctgttcgatgggagtgcctt
ttcaggacacccttgcacaactatgacgcagttattcttctccacagagacaaattacct
tatccacgtcgtcttctgtttccatctgaacttaaccaagggaagcatgtagcacgggga
aaagcgagtagattgtttaacccatttatgccgcctggagatttgaagagaagccatgaa
gagcttaagaataagctaatggtggactttgagccgaccaagtgcttgttgagtgggttg
caggaagagtttgggacgttgaagccgtggtatgatcatataggaggtgacgcaattggt
ttaacatggaacaaacacaattcaaagaaacgagaacgagatgaagaggaagaagaaagt
aatccaatggagatgttgaaggcggtaggcgaaatgggtaaagggttggtaagggatatc
tatttgctcaagcctccacgctttgtctaa
DBGET
integrated database retrieval system