Arabidopsis lyrata (lyrate rockcress): 9324210
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Entry
9324210 CDS
T01578
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9324210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9324210
Spliceosome [BR:
aly03041
]
Complex A
U1 snRNP components
U1 related factors
9324210
Complex B
9324210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
9324210
NCBI-ProteinID:
XP_002886633
UniProt:
D7KXB4
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MADESSSPATGDLNSQKPEATTPIPIPNPNPNPSLTTPPPQHHSQPQVAALIPPGPPYTP
PSQIPGSLLPTNLPPPPPFRPGMQFTPAGNFQNPSSGVPPPGVNSMAVPGSMPQYQLQPP
NQPGMRPYQPMANGYPGIHGVAPPPGLLRYPSPYPTMVRPGFIMRPPGTIGAVQLAPRPA
VPGMPGLRPVMPPMVRPASLPFVTPAEKPQTTIYIGKIATVENDFMMSILEFCGHVKSCL
RAEDPTTKKPKGFGFYEFESAEGILRAIRLLTKRTIDGQELLVNVNQATKEYLLKYVEKK
IETAKKAKESQAVGTEENQAEGPESERRKLESAENETGKDGEPKSKENIDIANSAVINDE
EREADREAMEKIESAIEERLKSNPLPPPPPPPPADRSGMELAFTSKDGDSNTDIARSDAA
ANDVETSREQNRPDTSSPDWSKRNDRRSRERGEKEQEIDRLEREAERERTRKERELRRKL
EDAERAYQTRLRQWERSEREKEKERQYEKEKEKDKERKRKKEIRYEEEEEEDDDDSRRRW
HRAALDERRRRRLREKEDDLADRLKEEEEVAEAKRNAEEQKLQQQQLDALRILSGQAAIG
SETVQTSPIENDHKATLQTVGESANEHHAADFEQNGSGNESMAIDNNSGSEAHAPSKKLG
FGLVGSGKRTSVPSVFYEEDEDEARKAKKMKPLVPIDYSTEEQEAVAHGGSGNTPPHLAL
AAEFAKRISSTNPKEETIETEKQRSRRSHDKSSHRDRERERDRDRVRDRGDGHSGPTKDA
KESGKAKIPDTKFLDAKQLIDTIPKTKEDLFSYEINWAMYDKHQVHERMRPWISKKIMEF
LGEEEATLVDFIVSNTQQHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKRVEAGVP
VKSKA
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaatcttcttctccggccacgggggatctcaattctcagaaaccagaagcc
actactccgattccaattcccaatccaaatcccaatccttctctaacaacaccaccgcct
caacaccattcgcaaccacaagtagctgctctgattccgcctggtccgccttatactcct
ccttcacagattcctggctcacttctccccaccaatcttccgccgccaccaccattccgt
cccggtatgcagttcactcccgctgggaattttcaaaaccctagctctggagttcctccg
cccggcgtgaattctatggcggttccaggatctatgcctcagtatcaactgcagcctccg
aaccagcctggtatgaggccttaccagcctatggctaatggttatcccggaattcatggc
gttgctcctcctccggggcttctccggtatccttctccatatccaacaatggttcgtcct
gggttcattatgcgcccgcctggtacaatcggtgctgttcaactagcaccacgacctgct
gtcccgggaatgcctggtctccgtcctgtaatgcctcctatggttagaccagcttctctt
ccttttgtaacacctgcagaaaagccccagaccacaatttacattggcaagatagcaacc
gtggaaaatgactttatgatgtctattctcgagttttgtggccatgtcaaaagctgttta
cgtgcggaagatcctaccaccaagaaacctaaaggttttggattctatgaatttgaatca
gctgaagggattctccgtgcaatacgcctactgaccaaacgcactatagatggacaagaa
cttttggtgaatgttaatcaagcaacaaaggagtatttgctaaaatatgttgagaagaaa
atagagactgcaaagaaagccaaggaaagtcaagctgtaggaactgaagagaaccaagct
gaaggtcctgaaagtgagcgacgaaaacttgagagtgctgaaaatgagacagggaaagat
ggagaacccaagagtaaagaaaacatcgatattgcgaattctgcggtcataaatgacgaa
gaaagggaagcagacagagaggctatggaaaagattgaaagtgctattgaagaaaggtta
aagtccaaccctctgcctccaccacccccaccaccacctgctgatcgttcaggcatggaa
cttgctttcacatctaaggatggtgactccaacactgacatagctaggagtgatgccgca
gcaaatgatgttgagacttctagagaacaaaataggcctgacacaagctctcctgattgg
agtaagagaaatgaccgaagaagcagagaaagaggtgaaaaggagcaagaaattgataga
ctcgagagggaggctgaacgagaacggacaaggaaagagagggagctaaggaggaaactt
gaggatgcagagcgtgcttaccagactcgtcttcgacaatgggaacgcagtgaaagagaa
aaggagaaagaacgacagtacgagaaggagaaagagaaagataaagagcgtaagaggaaa
aaggaaatccgctatgaagaagaagaggaagaagacgatgatgattcaagaagaagatgg
catagggctgcattagatgagagaagaagacgacgactaagagaaaaggaggatgactta
gctgatagattgaaagaagaagaagaggttgctgaggcgaagagaaatgccgaggagcaa
aagttgcagcaacagcaattagatgccttaaggatcctatctggacaggcagctattgga
agtgaaacggttcagacatcacctattgaaaatgatcataaggcaactctccaaactgtc
ggtgaatctgccaatgagcaccatgcagcagattttgaacaaaatggttctggtaatgaa
tccatggctattgataataatagtggatcagaggcacatgctccctcaaagaaattagga
tttgggcttgtgggatccggaaagcgaacatctgtgccttctgttttctatgaggaggat
gaagacgaagcgcgtaaggctaaaaagatgaaacctttggttcctatagattactcaacc
gaggaacaggaagccgtggcccatggtggctcagggaatacaccacctcatttggcttta
gccgctgaatttgctaaacgaatttcgagtactaatcccaaggaagagacaatagaaacc
gaaaaacaaaggagcagacgttctcatgataagtcaagccaccgggacagggaaagggaa
agggacagggacagagtcagggaccgaggtgacgggcatagtggtccaaccaaagacgct
aaagagtctggaaaagcaaagatacctgataccaagtttctggatgcgaaacaattgata
gatacaattccaaagacaaaggaagacttattttcgtacgagataaactgggctatgtat
gacaagcaccaagtgcacgaaagaatgagaccatggatctcaaagaaaattatggagttt
ctcggagaagaggaagccacgctggtagatttcatcgtgtcaaacactcaacaacacgtg
aaggcgtctcagatgctcgagctgttgcaatcaattctagacgaagaagctgagatgttt
gtgctgaagatgtggagaatgctcatctttgagatcaagcgggtcgaagctggagtcccg
gtaaaatccaaagcctga
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