Arabidopsis lyrata (lyrate rockcress): 9324299
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Entry
9324299 CDS
T01578
Name
(RefSeq) mechanosensitive ion channel protein 3, chloroplastic isoform X1
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9324299
Transporters [BR:
aly02000
]
Other transporters
Pores ion channels [TC:
1
]
9324299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MSL2_3
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
Cyclin_C
Motif
Other DBs
NCBI-GeneID:
9324299
NCBI-ProteinID:
XP_020890560
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MMMRTVSLPLSHDLNVHKIHEASGYHNSAAAKNRVYLTRTGLSSCATRQDVWSLQLLESL
SGSIVPVSSRCNAFVCRSALFPGNGNEGPILKSTAVIFTRAYDALRGNHLMKLIPAVGIL
AFATWGLRPLLRLARATLFEKGNDANSQKSSTQYIVVSYLQPLLLWSGAILLCRTLDPIV
LPSSSSQAVKQRLLTFARSMSTVLAFACCLSSLLQQVQKFFMETNNPADTRNMGFSFAGK
AVYTAAWVAAASLFMELLGFSTQKWLTAGGLGTVLLTLAGREILTNFLSSIMIHATRPFV
LNEWIQTKIGGYEVSGTVERVGWWSPTIIRGDDREAVHIPNHQFSVNIVRNLTQKTHWRI
KTHLAISHLDVSKINNIVADMRKVLSKNPQIEQQKIHRRVFLEDIDPENQALRILISCFV
KTSRFEEYLCVKEAVLLDLLTVIRHHGARLATPIRTVQRMRNEAEVDSAGFSDIIFNQAA
MNRRFMLIEPSYKINSDDNSKSPSPSPGQKSEERDLQEEPSETKAETENNGSASVLISNA
KKEKQKTALGSNSSTGTKGSPTSTSDQPVAQKSEEKKKESVGDSNKAEKDEVYDDEGTTE
QTLKSKARQGTEKSSGDSKARDGGGSGTSSFLEENLVLGVALDGSKRTLPIDEEVKASGA
LMDSEELGIGSE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgcgtactgtctctttgccattgtctcatgatctcaatgttcataagatccat
gaagcttctggataccataatagtgcagctgctaaaaatcgtgtgtatctgactcggact
ggtctttcatcatgtgctacgagacaagacgtttggagtcttcagcttctagagagcttg
agtggttcaatagtacctgtatcatctaggtgtaatgcattcgtttgccggtcagctctc
tttccagggaatggaaacgaaggccctattcttaaatcaactgcagtaatattcacaagg
gcatatgatgctttacgcggaaatcatttaatgaaactaattccagcagttgggattctt
gcatttgctacatggggtcttagaccccttctgcgccttgccagagctaccctgtttgag
aaggggaatgatgcaaattcacagaagagtagcacacaatacattgttgtgtcatatctt
cagcctttgctgctttggagcggagctatccttctatgcagaacattggacccaatagta
ttgccttcaagttccagccaggctgttaaacagcgtcttctgacctttgctcggtccatg
tcaacggtgttggcatttgcttgctgtttatcaagcctacttcagcaggtgcagaaattt
tttatggagacaaataatcctgctgataccagaaatatgggtttcagttttgctggaaaa
gctgtttacactgctgcgtgggttgctgctgcttcattgtttatggagctgttgggcttc
tctacccaaaagtggctaacggctgggggtctggggacagtactgctaactcttgctggt
cgtgagatacttacaaactttctttcaagcattatgattcatgctacacggccctttgtt
ctgaatgagtggatccagaccaagataggaggctatgaagtttctggcacagtagagcgt
gtcggttggtggtcacctacaattatcagaggtgatgaccgtgaagcagttcatattcct
aaccaccagtttagtgtaaatatcgtgagaaatctcactcagaagacgcattggcgcatc
aaaacacatcttgccatcagtcatcttgatgtcagcaaaattaataatatcgtagctgat
atgcgcaaggtgttgtctaaaaatcctcaaatcgagcagcaaaaaatacacagaagagtc
tttttggaagatatagatccagagaaccaagcactgaggatcctaatatcctgttttgta
aagacttcacgttttgaagaatacctgtgcgttaaggaagcagtgctcttggatcttctt
actgttattaggcatcacggggcacgtctagcaactcccattagaacagtacagaggatg
cgtaatgaggctgaggtggacagtgcaggattttcagacatcattttcaatcaagcagcg
atgaaccgtcgattcatgctgattgagccttcctataaaatcaacagcgatgacaactca
aagtctccctcacccagcccagggcaaaagagtgaagaaagggaccttcaagaagaacca
tcggaaaccaaggccgaaacagaaaacaacggatcagcgtcagtgctgatttcaaatgcc
aaaaaagagaaacagaaaacggctcttggttccaactccagtacaggcactaagggttca
ccaacctcaacatccgaccagccagtagcacaaaagtcagaagaaaagaagaaagagagc
gtgggagattcaaataaagcagagaaggatgaagtttatgatgacgaaggtacaacagag
cagacattgaaatcaaaagcaagacaagggactgaaaagagcagtggagattcgaaagct
cgagatggtggtgggtctggtacaagttcttttctggaggagaaccttgttctgggtgtt
gcattggatggctcaaaacgtacactcccgattgatgaagaagtcaaagcatctggtgca
ttaatggattctgaagaacttggtataggatcagaatga
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