Arabidopsis lyrata (lyrate rockcress): 9324540
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Entry
9324540 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 1 isoform X1
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9324540
03036 Chromosome and associated proteins [BR:
aly03036
]
9324540
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9324540
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9324540
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
9324540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
PHD
RING_XB3-XBAT31
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
9324540
NCBI-ProteinID:
XP_020865646
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAPEVQFPCDGDGVCMRCQGKPPAEETLTCGTCVTPWHVSCLLPESLSSSTGEWQCPDCS
GDVVPSAVPVTGNANAGLETSGSVLVAAIRAIQADVNLTEAEKAKRRQKLMSGGGDDRLD
EEDKKKLEIFCSICIQLPERPITTPCGHNFCLRCFEKWVGQGKLTCMTCRTKIPKNVARN
PRINLALVSAIRLASVTKCSVDATAAKVHHIIRNQDRPEKAFTTERAKKTGKANAASGRI
YVTVPGDHFGPIPAENDPTRNQGVLVGESWEDRQECRQWGAHFPHVAGISGQSAVGAQSV
ALSGGYDDDEDHGEWFLYTGSGGRDLGGNKRTNKIQSSDQSFAKMNEALRLSCKMGYPVR
VVRSHKEKRSAYAPKEGVRYDGVYRIEKCWSNVGIQGSYKVCRYLFVRCDNEPAPWTSDE
HGDRPRPLPNIPELKKATDLFVRMESPSWDFDEAEGRWKWMKSPPVSRKAVAALDPEERK
IIRKAKNGNNRLLKGKHRLPLVLLLYLAQYITVIWVIFDTEFGCQICRKVLSFPVTTPCA
HNFCKACLEAKFAGVSQVRERSRGGRTLRAKKNIMTCPCCTTDLSDFLQNPQVNREMMEV
IENLKKKEEEAESSKDTAESSGGNNTESEEEETQTVSEVEPPTKRIKLVDTVAAAATDCV
GK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgaagttcagtttccttgcgacggagacggtgtatgtatgcggtgccagggg
aaacctccggcagaagagactctcacgtgtggcacgtgcgtcacgccttggcacgtgtcg
tgtctccttccagaatcactctcttcttccactggagagtggcagtgtcccgattgctct
ggcgatgtcgttccctccgccgttccggttaccggaaacgctaacgctggacttgaaaca
tccggttcagttctcgtagcagcgatccgtgcgattcaggctgatgtgaatttgacggaa
gctgagaaagccaaaaggaggcagaaactgatgagtggtggtggtgacgatcgtctcgat
gaagaagacaaaaagaagttagagatcttttgttctatttgcattcaattgccagaaaga
cctatcacgacaccgtgtgggcacaacttctgcttgagatgtttcgagaaatgggtaggt
caagggaagctaacttgtatgacatgccgaaccaaaattccgaaaaatgttgcgcgaaat
cctcgcatcaacttagctctagtctctgctattcgtttagcaagtgttaccaaatgttct
gttgatgcaactgcggccaaggttcatcatattatccgcaaccaagaccgtcctgagaaa
gcctttactaccgagcgggctaaaaagactgggaaagctaatgctgctagcggaaggatt
tatgtcacagtacctggtgatcattttggtcccataccagctgaaaatgatcccactagg
aatcaaggtgttttggttggagaatcttgggaggacaggcaagaatgtaggcagtgggga
gctcatttcccgcatgttgctggcatttccgggcaatcagcggttggagctcagtctgtg
gcgctctctggaggttatgatgatgatgaggatcatggtgaatggtttctctacacagga
agtggtggaagggatctcggaggaaacaaaagaactaacaagatacagtcttctgaccag
tcgtttgcaaaaatgaatgaagctctaagacttagttgcaaaatgggctatcctgtccga
gttgtcaggtctcacaaggagaagcgttctgcatatgcccctaaggaaggagtgagatac
gatggggtctaccgaatcgagaagtgctggagcaacgttggaatacagggttcttataag
gtctgtcgttacctgtttgttagatgtgacaatgagccagctccatggaccagtgatgag
catggcgatcgtccaagacctttgcctaatattccagagcttaagaaagctactgacctg
tttgtgagaatggagagtccatcatgggatttcgatgaagctgagggtcgttggaaatgg
atgaagtctccacctgttagcagaaaggctgttgctgctttggatcctgaggagaggaag
atcattaggaaagcaaaaaacggaaataacagacttctcaaaggtaaacatcgattacca
cttgtgttattattgtatctagcacaatacataactgtgatttgggtaatatttgacaca
gaattcggctgccaaatctgtcggaaagtgctgagttttccagtgacgaccccttgtgct
cacaacttctgcaaagcatgcctggaagctaaatttgctggggtctctcaagtgagagag
agaagcagaggcgggcgcacactacgtgcaaagaagaacataatgacctgtccgtgctgc
actaccgacctctccgactttcttcaaaacccgcaggtgaatagagaaatgatggaagtt
atcgaaaatctgaagaagaaagaggaagaggctgaatcaagcaaagacactgcagagtct
tctggaggaaacaacaccgagtctgaagaagaagaaactcagactgtgtctgaagttgaa
ccaccaacgaagaggatcaaattggttgatacagttgcagcagcagccactgactgtgtt
ggaaagtaa
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