Arabidopsis lyrata (lyrate rockcress): 9324688
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Entry
9324688 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9324688
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9324688
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9324688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
Sina_RING
zf-RING_2
YxzE
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
9324688
NCBI-ProteinID:
XP_020889986
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MLQVLQAIVLFILFWVWLSWMGGGSSKESNRGESSRRYERSVSGGSSYSSAWDQNSYYQT
PNHPSASPVSSYNSGRQTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVT
KSNEWTGARSFGRKSLHYIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQD
VFSFNPNDTFCNGFEEVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLII
ADGQVTRSVDTDNGGFSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPAR
AFDNFQFVNFTDIMSKNIDPARKEAEFALSALMEIPSQYKATLELGLLGQRTGHCPNRIA
LPPPTYATQSMRNSPRTSRSTSFQNRPYDNGVSSTPPSTTRNESQQQVCPVCLVSPKNLA
FNCGHQTCSECGEDLNICPICRSSISVRIKLY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagtgttgcaggcgattgttttgtttatcttgttttgggtttggttgtcttgg
atgggaggaggtagctcaaaagagtcgaatagaggtgaaagtagtcgaaggtatgaacgt
agtgtgtctgggggctcgtcttactcgtctgcttgggaccagaacagctattatcagaca
ccaaaccatccatctgcgtctcctgtttcctcctacaattctgggagacaaacaccgaag
aatcttgagaggaagtattcacggattgctgataactaccgttccatcgatgaggttacc
gctgctctttcacatgccggtttggagtcctcgaatctcattgttggtatagatgtcaca
aagagcaatgagtggacaggggcgagatcatttggtaggaagagtctgcattacattgga
acaactccaaacccttaccagcaagctatttccatcattggaaagactttgtcagttttt
gatgaggataatttgatcccctgttatggattcggagatgctacaacccatgatcaggat
gtcttcagtttcaatcccaatgatacattttgtaacgggtttgaagaagttctcatgtgt
tacagagagattgttccgcagctccgtctttcaggtccgacatcttttgcacccatcatt
gaaagggccatgacaattgtggaagaaagtggtggccagtaccatgttcttctcatcatc
gctgacggacaggtgacaagaagtgttgatacagataacggcggattcagtccacaggag
cagcagactattgatgccattgtaagagcaagtgaatatcctttgtctatagttcttgtt
ggtgttggagatggcccttgggacaccatgagacagtttgatgacaacatccctgctcgt
gcctttgacaatttccagtttgtgaatttcacggatataatgtcaaagaacattgatcca
gcaagaaaagaggcagaattcgcgctttccgccttgatggagatcccgtctcagtataaa
gccaccctcgagctaggcttacttggacagagaactggacattgtccaaacaggattgcg
cttccaccaccaacttatgctactcaatctatgcgcaacagcccaagaacttcccgatca
accagctttcaaaacagaccatatgataatggtgtttcctctacaccaccttcaactact
cgtaacgagagccagcaacaggtttgccccgtatgtctagtgagtccaaagaacttggct
ttcaactgtggtcatcagacttgctcagaatgtggggaggacctcaatatttgccccatt
tgccggagctcaatctcggttcgtatcaagctttattaa
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