KEGG   Arabidopsis lyrata (lyrate rockcress): 9324925
Entry
9324925           CDS       T01578                                 
Name
(RefSeq) RING-H2 finger protein ATL11
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9324925
Enzymes [BR:aly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     9324925
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    9324925
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 Rad50_zn_hook NAF PS-DH zf-Nse
Other DBs
NCBI-GeneID: 9324925
NCBI-ProteinID: XP_020889937
LinkDB
Position
Unknown
AA seq 403 aa
MNPKGNNNLNRSIIGGHDHGSILQLLLFLLLLSSHGGFQLVAGQATHGGSDVPGDSSRFD
PTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWFATNLQQARGLDASV
IETFPTFRYATVKALRIGKEALECPVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLHSHA
TCPLCRADLVPVPGEPIVSIQIPGLVNDPPGSDPSGDRIRVLGSPDARLIDSVALTCNQS
MPRRSMSTGWNLAGMFTNSDRTGQHSGNLDRFTLKLPQDIHNKLVNPSLSKGHVLLPHVM
SSARGYRSGSLGSERNYFYYERFDQDGRLDRRPFSITPPYRTGSINNTSPGDSSDHVRAG
SPKSLLLAMKSPFDRLFLGKNNNVGERSSDHLRSGDATPSNTV
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaaccccaaaggtaataataatctcaaccgttcaatcatcggtggtcatgatcatggc
tcgatcctacaactactcctctttctgctactcctctccagccacggcggatttcagctc
gtcgcgggtcaagccactcacggtggttcagacgttcccggagatagctctcggtttgac
ccaaccatggcaatactcatgatcgtcctcgtcagcgtcttcttctttctcgggtttttc
tcggtctatatccgaagatgtcttgagcgagtcatggggatggactacggaaaccccaac
gacgccggaaactggtttgccacaaacctgcaacaggcgcgtgggctcgacgcgtcggtc
atcgagacttttccaactttccgatacgcaaccgtgaaggcgcttaggatcggcaaagaa
gcgcttgagtgtcctgtttgcttaaacgagtttgaagacgatgaaacgctgcgtttaata
cctaaatgctgccacgtgttccatcctggttgcattgacgcttggctccactctcacgcc
acgtgtcctctatgccgcgctgatcttgtacccgtgccgggtgaacccatcgtctctatt
caaatacccggtttagttaacgatcctcccggttctgatccgagcggtgatcggattaga
gttttaggttctccggacgcacgattgattgactcggtggcgttgacttgtaatcagagc
atgccacgtaggtctatgtctaccggatggaatttagccggaatgttcacgaattctgat
cggaccggtcaacattcagggaatctagaccgattcacgcttaaattaccgcaagacatt
cacaataagctagtgaatcccagcctttcaaaaggccacgtgttgttacctcatgtgatg
agttcagcgagaggatacagaagcggaagcttaggaagtgagcgaaactacttttactat
gaacggttcgaccaagatggccggttagaccgtagaccattctcaataactcctccatac
cggacaggttcaatcaataacacatcaccaggtgacagtagtgatcatgtgcgtgctggt
tcacccaaaagtttgcttctagcgatgaaatcaccgttcgatcgattatttcttggaaag
aacaacaacgtcggtgagcgttcgtcggatcaccttcgttccggcgatgctacaccgtcg
aatactgtgtaa

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