Arabidopsis lyrata (lyrate rockcress): 9324947
Help
Entry
9324947 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: exportin-T
KO
K14288
exportin-T
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9324947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9324947
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
9324947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
zf-C3HC4_5
UTP20
Motif
Other DBs
NCBI-GeneID:
9324947
NCBI-ProteinID:
XP_020890795
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MDDLEQAIVISFETGAVDSALKSQAVTFCQQIKETTSICSICIEKLWFSKLVQVQFWCLQ
TLQDVLRVRYGSMSVDEQSYVRKSVFSMACLEVIDNENAVRVVEGPPFVKNKLAQVLVTL
IYFDYPLIWSSVFVDFMPHLSKGAVVIDMFCRVLNALDDELISLDYPRTSEEISVAARVK
DAMRQQCVPQIARAWYDIVSLYRNSDPDLSATVLDCMRRFVSWIDIGLVANDAFVPLLFE
LILSDGLSDHFRGAAAGCILAMVSKRMDPQSKLPLLQTLQISRVFGLVSGDVDSELVSKV
SALLTGYAVEVLECHKRLNSEDTKAVSMDLLNEVLPSVFYVMRNCEVDSTFSIVQFLLGY
VSTLKGLPALKEKQLLHITQILEVIRIQICYDPMYRNNLNLLDKIGLEEEDRMSEFRKDL
FVLLRTVGRVAPEVTQHFIRNALANAVXSSSESNVEEVEAALSLLYSFGESMTEEAMKAG
SGCLSELIPMLWTTQFPGQSYRLVALVYLENITRYMKFIQENSQYIPNVLGAFLDERGLH
HQNVHVSRRAGYLFMRVVKLLKSKLVPFIDKILQNLQDTLSQLTTLNFASRELSGTEDGS
HIFEAIGIIIGLEDVPAEKQSDYLSLLLTPLCQQIEAGLVQAKAASSEDFPVKIANIQFA
IVAINALSKGFSERLVTASRPGIGLMFKQTLDVLLRVLIEFPKVEPLRSKVTSFIHRMVD
TLGSAVFPYLPKALEQLLADSEPKEMVGFLVLLNQLICKFNSALRDILEEVYPVVADRIF
KVIPRDGLPSRPGAVTEELRELIELQRMLYTFLHVIATHDLSSVFLTPKSTAYLDPMMQL
LLNTSCNHKDITVRKACVQIFIKLIKDWCAKPYSEEKVPGFQNFVIEAFATNCCLYSVLD
KSFDFSDANTHALFGEIITAQKVMYEKFGNAFLMHIMSKSFPSAQIPQDLAEQYCQKLQG
NDIRGLKSYYQSLIENLRLQQNGSHVFR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccttgaacaggcaatagtaattagctttgaaactggtgctgttgattcggcg
ttaaagtctcaagcggttactttttgtcagcaaatcaaagagactacatctatttgtagt
atatgtattgagaagttatggttttctaagcttgtccaagttcagttctggtgtttgcaa
acgctgcaggatgttttaagggttagatacggatctatgagcgtggatgagcagagttat
gtgaggaaatcagtgttttcaatggcttgtttggaggttattgataatgagaatgctgtt
agagttgtcgaaggacctccatttgttaaaaacaagcttgcgcaggttttggttactttg
atctattttgactaccctttgatttggtcctcggtgtttgttgattttatgcctcatttg
agcaaaggggctgttgtgatcgacatgttttgtcgggttttgaatgcgttggatgatgag
ttgattagcttggattacccccggacttctgaagagatatctgtggctgctcgagtcaag
gatgctatgaggcaacaatgtgtccctcagattgctagagcatggtatgacattgtatcg
ttgtacaggaattccgatcctgatctttctgctactgtgttagattgcatgagaagattc
gtctcttggattgacattggtttggttgccaatgatgcatttgttccactgctgtttgaa
ttgattttgtctgatggattgtctgatcattttcgcggtgcagcagctgggtgtatttta
gccatggtttctaagcggatggatccccagtcaaaactgccccttctgcagacccttcaa
ataagtcgtgtttttggtttagtatccggagatgttgattctgaattggtatcaaaagta
tctgctttgcttactggctatgctgttgaggttctagaatgccataagcggttgaactca
gaggacaccaaggcagtctccatggatttgctgaacgaagttctgccatcagttttttat
gtcatgcggaattgtgaggtggattctacttttagcatcgtccagtttctcctgggttac
gtttccactctcaaaggcctccctgcattaaaggagaagcagctactccacattacacag
attctcgaagtgataagaattcagatttgctatgatcctatgtatcgtaataaccttaat
ttactggataaaattggattggaggaggaagatagaatgtccgagtttagaaaagatctc
ttcgtcttgttacgtacagtgggccgtgttgctcctgaagttactcagcattttattcgt
aacgcactagcaaatgctgttngatcctcatccgagagcaatgttgaagaagtggaagct
gcgctctcgcttttgtattcatttggagagtctatgaccgaggaggccatgaaagcagga
tctgggtgtttgagtgaactaattccgatgctctggaccacacagttccctggacagtct
tatagacttgttgcactagtttacttagaaaacataacaaggtacatgaagtttattcag
gaaaattcccagtacattcccaatgttcttggtgctttccttgatgaaaggggtttgcat
caccagaatgttcatgtgagccgtagagcaggttacttgttcatgagagtcgtgaaattg
ttaaaatcaaagcttgtaccattcattgacaagatcctgcagaaccttcaagatacgttg
tcccagttgacgactttgaactttgcatcaagagaactttctggaactgaagatggcagt
cacatttttgaggctattggcataatcatagggttggaggatgtcccggctgaaaagcag
tcagattatctgtctttactgcttacccctctctgtcaacagattgaggcaggacttgtg
caggcaaaagctgcaagttccgaagattttcctgtgaaaattgcaaatatccaatttgct
attgtggcaattaatgctctcagcaagggcttcagtgaacgtcttgttacagcgagtcgt
cctggaattggtctcatgtttaagcagacactggatgtgcttctaagggttctaattgaa
tttccaaaggtcgagcctttgcggagtaaggtcacatcattcatacaccgtatggttgat
acccttggttccgctgtgttcccttatcttcccaaggctttggaacagctacttgctgac
agtgagccaaaggaaatggttggtttcctggtattactcaatcagcttatctgcaagttc
aacagcgctctccgtgatatactggaagaagtatatcccgtggttgctgataggattttc
aaagtaattccaagagatgggctcccctcacgccctggggctgttactgaggaattgagg
gaactgatagagctccaaaggatgttgtatacatttcttcatgtgatagccacacacgat
ctctcttctgtatttcttacgcccaaaagtacggcgtatctagatcctatgatgcagctg
cttttgaatacttcttgtaatcacaaggatattaccgtacgtaaggcctgcgtgcagata
tttattaagctaattaaagattggtgtgccaagccatatagcgaggagaaggttccaggt
tttcagaatttcgtaatcgaagcgtttgcaacaaactgttgtttgtacagtgtactagat
aaatccttcgatttcagtgatgcaaatactcacgcgttgttcggagaaatcatcacagct
cagaaagtgatgtatgaaaaatttggtaatgcgtttctcatgcatattatgtcgaaaagt
tttccatcagcacagattccacaagatttggcggagcagtattgccaaaagttgcagggt
aatgatatccggggcctcaagtcatactaccagtcccttatagaaaatctcaggcttcaa
caaaacgggagtcacgttttcagatag
DBGET
integrated database retrieval system