Arabidopsis lyrata (lyrate rockcress): 9324979
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Entry
9324979 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9324979
KO
K14315
nucleoporin NDC1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9324979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9324979
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
9324979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
9324979
NCBI-ProteinID:
XP_002888916
UniProt:
D7KR87
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MPSPPVPETVVSHRFAAFLIWQSIPSSAIFFFFNLFLFSTTSIISFFLTFLVFHCSQLLF
SVSLALLSTPTPDSPLSPLQFALGLLRHLSDPEFRRRARVSLRIVLFVCATSLAGFCSAA
VFCLSSDSFGPIGRIGFRGFVTGLLYAVLFVIKQRWVLEFPIIQRPPFFSFKIGLPSALT
QALKLSGVLYVLSTIMLLFLLDWSGGLVSVSRFLGEQVLSYAGSFCLILSWEVTHHIHKV
LHTKRFSFAPPKGSAAAETNPSEPLLAALEGSAPGSLEQSLAYLDLYMVSQNNVDTWRRA
AFFEESTETYKRVITLCLRPLEELASKLSSGLDHTFTEKGYQTPLQPPTESFIDPKFGES
LKSFQLYAWCAQTTASLTSISHKEDRLGVAQLSGGNADVVSTLLSLLLAIETFMGKKTNL
QSPQQLMGPASIKWATSSMVRKDVKPIKRSIGGMYSYAYAATDVLKISIYQILSTFREEM
LNSDRAGLLGRDWIGSKKPPFGTNDMLLQKLKLFLEFQA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcctccggtaccggagacggttgtgagccaccgcttcgcagcttttcttatc
tggcaatcgattccttcatcagccattttcttcttcttcaaccttttcctcttctccacc
acttcaatcatctcctttttcctcactttcctcgtcttccattgctcacagcttctcttc
tccgtctcactagctctcctctctactccgactccagattcgcctctctcccctctccaa
ttcgctctcggccttctccgtcacctctcggatcccgagttccgccgccgtgctcgcgta
tctttacgcatcgtgctcttcgtctgcgctacttcccttgctgggttctgctccgctgct
gtgttttgcttgtctagtgattcgtttggaccgattggaagaatagggtttaggggattt
gtgactggattgctttacgcagtcctcttcgtcattaagcagcgatgggttttggagttt
cccatcattcagcgtccaccgttcttcagcttcaagattggtcttccttcggctctaaca
caagctctgaagctatctggtgtgctttatgtcttgtcaacgataatgctattgtttctg
ctagactggtcgggtgggcttgtgtctgtatccagattcttgggtgagcaggtcttatct
tatgccggcagtttctgtttgattctctcttgggaagtcactcaccatatacataaggtt
ctgcacacaaaacggttcagctttgctcctccaaaaggatctgctgcagcagaaacgaat
ccaagcgagcctcttcttgctgctttagaagggagcgctccaggttccctcgagcagtct
cttgcataccttgatctctacatggtgtcacaaaataatgttgacacatggcgtcgtgct
gccttcttcgaggagtccaccgagacttacaaaagagtaatcactctatgcttgaggcct
ttggaagagctcgcctccaagttatcttctgggctagaccacacctttactgaaaaaggt
tatcagacaccactccagccaccaaccgagtcatttatcgatccaaagtttggggaatca
cttaagtctttccagctatatgcatggtgtgctcaaacaactgcatccctgacttcaatc
tctcacaaggaagacaggcttggagtagctcaactgtctggtggaaacgctgatgttgtc
tcaacacttctatcgcttttgctagctatcgaaacgtttatggggaagaagactaatctt
caatcacctcaacaactgatgggacctgctagtatcaaatgggcgacctcgagtatggtc
agaaaagacgtcaaacccataaaaagaagtattggggggatgtactcctacgcgtatgca
gctacagatgttttaaagatatcaatataccagattctgtccacattccgcgaggaaatg
ctcaacagcgacagagcaggacttcttggtagagattggattggaagcaaaaaaccgcct
tttggaacaaacgacatgctgctacagaagcttaagctcttcctcgagttccaagcttga
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integrated database retrieval system
