Arabidopsis lyrata (lyrate rockcress): 9325080
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Entry
9325080 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9325080 isoform X2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
9325080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9325080
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
9325080
DNA repair and recombination proteins [BR:
aly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
9325080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
9325080
NCBI-ProteinID:
XP_002887579
UniProt:
D7KSL8
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MKKSVREELTSTPETQLHSVVAYSPIRFLILFVFVFVSEATKNPNFTNPKFRFHMGEHSP
SQPSSQTHPQNQPESPNPETPNPIPPGTNDDDSASSAGVSGSIVSLTTIEAPRVTELGNV
SSPPSKIPLRPRKIRKLSPDDDASGNGDGFNPEHNLLATTSKPAVKSKLSQSRCVTVPRI
HARSLTCEGELEAALHHLRSVDPLLASLIDIHPPPTFETFHTPFLALIRSILYQQLAAKA
GNSIYTRFVALCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSG
IVNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNAMEDLPR
PSKMEQLCEKWRPYRSVASWYMWRLIESKGTPPNAAAVTAGAALSFPQLEDIQQQQEEQH
HQQQPQLMDPLNNVFSIGAWGQT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagcgttagagaagaattaacgtcaacacccgagacgcaacttcactcggtc
gtggcttattctccgattaggtttttgattctcttcgtcttcgtcttcgtctctgaagcg
accaaaaaccctaattttaccaatccgaaattccgatttcacatgggtgaacattcacct
tctcaaccatcgtctcaaactcatccccaaaatcaaccagaatcacccaatcccgaaacc
cctaatccaattccaccgggaactaacgatgatgactccgcctcatccgccggagtttct
ggctcaatcgtctcattaaccaccattgaagcaccacgagtcactgaattaggcaatgta
tcgtctccaccttccaaaatcccactccgtcctcgaaaaatccggaaactttcacccgac
gatgacgcttccggtaacggcgacggattcaatccggagcataaccttttggcgacgact
tcaaaaccggcagtgaagagtaaattgtcacagtcacgctgtgtaaccgtgccgagaatc
cacgcgaggtctctaacctgtgaaggcgagcttgaagcagcgcttcaccatctccgaagt
gttgatcctctgctcgcgtcgttaattgacattcacccaccaccaacgttcgagactttt
catactccgttcttggctttgattcgaagcattctttatcagcagttagcagctaaggca
gggaattcaatctacacccgcttcgttgccttatgcggcggtgaaaacggcgtcgttcca
gagaatgtattgcctttaacacctcaacagcttcgacaaatcggtgtttccgggcgtaaa
gccagttaccttcatgatcttgctaggaaatatcaaaatgggatcttgtcggattctgga
atagtgaatatggatgagaaatctttgttcaccatgttaacaatggtgaatgggattggc
tcatggtcagttcatatgtttatgataaactctcttcatagacccgatgtgttaccagtt
aatgatcttggtgtaaggaaaggtgtgcagatgcttaatgccatggaggatttgcctcgt
ccatcgaaaatggagcagctttgcgagaaatggcgtccgtatagatcagtagcgtcgtgg
tacatgtggcggctcattgaatctaaaggtacaccaccgaatgctgcggctgtgacggct
ggagctgctctttcgtttccacagttggaagacattcaacaacaacaagaagaacaacat
catcaacaacagccacagcttatggacccccttaataatgtgttcagtatcggggcatgg
ggccaaacatag
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