Arabidopsis lyrata (lyrate rockcress): 9325212
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Entry
9325212 CDS
T01578
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00061
Fatty acid biosynthesis
aly00071
Fatty acid degradation
aly01100
Metabolic pathways
aly01212
Fatty acid metabolism
aly04146
Peroxisome
Module
aly_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
9325212
00071 Fatty acid degradation
9325212
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
9325212
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
aly01004
]
9325212
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9325212
Enzymes [BR:
aly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
9325212
Lipid biosynthesis proteins [BR:
aly01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
9325212
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of breast milk
9325212
Exosomal proteins of breast cancer cells
9325212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9325212
NCBI-ProteinID:
XP_020890152
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MIPYAAGVIVPLALTFWVQKSKKEKKRGVVVDVGGEPGYAIRNHRFTDPVSSHWEHISTL
PELFEISCKAHSDRVFLGTRKLISREIETSQDGKTFEKLHLGDYEWLTFGKTLEAVCDFA
SGLVQIGHKTEERVAIFADTREEWFISLQGCFRRNVTVVTIYSSLGEEALCHSLNETEVT
TVICGSKELKKLMDIGQQLETVKRVICMDDEFPSDLNSNWMATSFADVQKLGRENPVDPN
FPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTIVPDLGKRDIYMAYLPLAHIL
ELAAESVMATIGSSIGYGSPLTLTDTSNKIKKGTKGDVTALKPTIMTAVPAILDRVRDGV
RKKVDAKGGLSKILFDFAYARRLSAINGSWFGAWGLEKLLWDVLVFRKIRAVLGGQIRYL
LSGGAPLSGDTQRFINICVGAPIGQGYGLTETCAGGTFSEFEDTSVGRVGAPLPCSFVKL
VDWPEGGYLTSDKPMPRGEIVIGGSNITLGYFKNEEKTKEVYKVDEKGMRWFYTGDIGRF
HPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSISPYVENIMVHADSFYSYCVALVVAS
QHTVEGWASKQGIDFANFEELCAKEQAVKEVYASLVKAAKQSRLEKFEIPAKIKLLASPW
TPESGLVTAALKLKRDVIRREFSEELTKLYA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgattccttatgcagctggtgttattgtgcctttggctttaacgttctgggttcagaaa
tctaagaaagaaaagaaaagaggtgttgttgttgatgttggtggtgaaccaggttatgcc
attaggaatcacaggttcactgatcctgttagttcccattgggaacatatctcaacgctt
ccagagctctttgagatttcctgtaaagctcacagtgatagggttttccttggcacccgg
aagctcatctctagagagattgagactagtcaggatggaaaaacttttgagaaacttcat
ttgggtgactacgagtggcttacttttgggaagacactcgaagctgtgtgtgattttgcc
tctgggctggttcagattggacacaagacggaagaacgtgtcgccatttttgcagatact
agagaagaatggttcatctccctacagggttgcttcaggcgaaatgtcactgtggtaact
atctattcatctttgggagaggaagctctttgtcactcgctgaatgagacagaggttaca
accgtaatatgtggtagcaaagaactcaaaaagctcatggacataggccaacagcttgaa
actgttaaacgtgtgatatgcatggatgatgaattcccatctgatttgaacagtaattgg
atggcgacttcatttgctgatgttcagaaacttggccgcgaaaaccctgtagaccctaat
tttcctctctcagcagatgttgctgttataatgtacaccagtggaagcactggacttccc
aagggtgttatgatgacacatggtaatgtcctagctacagtttcggcagtgatgacaatt
gttccagaccttggaaagagggatatatacatggcatatttacctttggctcacatcctt
gagttagcagctgagagtgtaatggctactattgggagttctattggatatgggtctccc
ttgacgctcacggatacttcaaacaagataaaaaagggtacaaaaggagatgtcacagca
ctaaagcccactataatgacagctgttccagccattcttgaccgtgtcagggatggtgtc
cgcaaaaaggttgatgcaaagggcggattgtcaaagatattgtttgactttgcatatgct
cggcgattatctgcaatcaatggaagttggtttggagcctggggattggaaaagcttttg
tgggatgtgcttgtgttcaggaaaatccgtgctgtgttgggaggtcaaatccgctatttg
ctctctggtggtgcccctctttctggtgacactcagagattcattaacatatgtgttggg
gctccaatcggtcagggatatgggctcacagagacttgtgctggtggaaccttctcggag
tttgaggacacatccgttggccgtgttggggctccacttccttgctcctttgtaaagcta
gtagactggcccgaaggtgggtatctaaccagtgataagccgatgccccgtggtgaaatt
gtaattggtggctcaaatatcacgcttgggtatttcaaaaatgaggagaaaactaaagaa
gtgtacaaggttgatgaaaagggaatgaggtggttctacacaggagacataggacgattt
caccctgatggctgcctcgagataatagaccgaaaaaaggatatcgttaaacttcagcac
ggagaatatgtctccttgggcaaagttgaagctgctctcagtataagtccctatgttgaa
aacataatggttcatgctgattcattctacagttactgtgtggctcttgtggttgcgtcc
caacatacagttgaaggttgggcttcaaagcaaggaatagactttgccaacttcgaagaa
ttgtgcgcgaaagaacaagccgtgaaagaagtgtatgcgtctcttgtcaaggcggctaaa
caatcacgattggagaagtttgagataccagcaaagatcaaattgttggcatctccctgg
acgccagagtcgggcttagtcacagcagctttaaagcttaaaagagatgtaattaggagg
gaattctccgaagagctcaccaagttatatgcctaa
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