Arabidopsis lyrata (lyrate rockcress): 9325263
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Entry
9325263 CDS
T01578
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00541
Biosynthesis of various nucleotide sugars
aly01100
Metabolic pathways
aly01250
Biosynthesis of nucleotide sugars
Module
aly_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
9325263
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
9325263
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
DUF4942
Motif
Other DBs
NCBI-GeneID:
9325263
NCBI-ProteinID:
XP_020890438
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All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MASYTPKNILITGAAGFIASHVANRLIRSYPHYNIVVLDKLDYCSNLKNLNPSKQSPNFK
FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVILH
KGEVGHVYNIGTKKERRVNDVARDICKLFSMDPEANIKFVENRPFNDQRYFLDDQKLKKL
GWSERTTWEEGLKKTMEWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATL
SEKPSQTHMVVPSPRSSGTPQKPSLKFLIYGKTGWIGGLLGKICEKQGIAYEYGKGRLED
RSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLM
MNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISVEMAKRNLKGIWNFTNPGVVS
HNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK
YAFEPNKKT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtacactcccaagaacattctcatcaccggagctgctggtttcattgcatca
catgtcgccaacagactcatacgaagctatcctcattacaacatcgttgtgcttgacaaa
cttgattactgttcaaatctcaagaatctcaacccctctaaacagtctccgaatttcaag
tttgtcaaaggtgatatcgctagtgctgacttggtgaatcatcttctcatcactgaaggt
atcgacaccatcatgcatttcgctgctcagactcacgtcgacaattccttcggtaacagt
ttcgagtttactaagaataatatctatggaactcatgtgcttcttgaggcttgtaaagtt
actggtcagattaggaggtttattcatgtcagtactgatgaggtttatggtgaaactgat
gaggatgctcttgttggtaaccatgaggcttctcagctacttccgacgaatccttactct
gccacgaaagctggtgcggagatgcttgttatggcttatggtaggtcttatgggttgcct
gttattaccacacgtgggaataacgtctatggaccgaatcagtttcctgagaagttgatt
cctaagttcattttgctggcaatgagagggcaagttcttcccattcatggagatgggtca
aatgtcaggagctacctgtactgtgaagatgttgctgaggcttttgaagttattctgcac
aagggagaagttggccatgtttacaatattgggacgaagaaggagaggagagtcaatgat
gttgccagagatatctgcaaactcttcagcatggaccctgaggcgaacatcaagtttgtc
gagaacagaccttttaacgatcaaaggtactttcttgatgatcagaagctcaaaaagttg
ggatggtcagagaggaccacgtgggaagaagggttgaagaaaactatggaatggtacaca
cagaacccggagtggtggggtgatgtttctggagcattgcttcctcatccaaggatgttg
atgatgcctggcgggcgacactttgatggctcggaggacaattctttggcagctacttta
tcagagaaaccaagtcaaacccatatggttgttccaagcccaaggagcagcggcacacct
caaaagccttcactgaaattcttgatatatggaaagaccggatggatcggtggtctgctt
ggaaagatctgtgaaaagcaaggaattgcttacgagtacgggaaaggtcggttggaggat
cgatcatctcttctgcaggatattcagagcgttaagccaacccatgttttcaattccgct
ggtgtgactgggagacccaatgttgactggtgtgagtctcacaagaccgagactatccgt
gccaatgtagctggcacattgactctagctgatgtctgcagagagcatggactcctgatg
atgaatttcgctactggttgtatatttgaatatgacgacaagcatccagaaggttcagga
attggcttcaaggaggaagacacccccaacttcactggctctttctactcaaaaaccaaa
gccatggtcgaggagctgctaaaagagtatgacaacgtatgcacattgagggtaaggatg
ccgatctcctcagatctaaacaacccgcgcaacttcatcaccaagatctccaggtacaac
aaagtggtgaacatcccaaacagcatgactgtgttggacgagcttttaccaatctccgtc
gagatggcaaaaagaaacttgaaaggaatctggaacttcacaaacccaggtgtggtgagc
cacaacgagatcctagagatgtacagagactacatcaaccctgaattcaaatgggcgaac
ttcacattagaggagcaagctaaagtcattgtggcaccaagaagcaacaacgagatggat
gcttccaagctcaagaaagagttccctgagctactctctattaaggagtctctgattaag
tatgcattcgagccaaacaagaaaacctga
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