Arabidopsis lyrata (lyrate rockcress): 9325268
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Entry
9325268 CDS
T01578
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03030
DNA replication
aly03410
Base excision repair
aly03420
Nucleotide excision repair
aly03430
Mismatch repair
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9325268
03410 Base excision repair
9325268
03420 Nucleotide excision repair
9325268
03430 Mismatch repair
9325268
03440 Homologous recombination
9325268
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9325268
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9325268
03400 DNA repair and recombination proteins [BR:
aly03400
]
9325268
Protein phosphatases and associated proteins [BR:
aly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
9325268
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
9325268
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
9325268
MMR (mismatch excision repair)
DNA polymerase delta complex
9325268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
9325268
NCBI-ProteinID:
XP_002887749
UniProt:
D7KVT7
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MTHTETLNILDEIESLVSDQLQVVSYKWLSRNFSLSSNTAKRLLKDFVEKQGKGLEVVYI
VSGLLKNGPSNYHARLASSTELPEVEKEFNGKYSVHIYSVQASIPMDPAAIWNTEFVQAE
ELFRQHSAIDNCLKGNRFCGVSNSCVKRNIEGTTGNVTAPRTEIVRTTGRSNSSLNFQKS
TLPSNQEKNFQHSSHNVVHQAKSETTAAPAKNQSAKSSLDKEKAFPVPANKKNGQGEKKV
TGTGGLLKNMWGRVPMKTEDDTPTVEVKNYITDHSEAEKPSHDTDNKGGSDDETRDVNFM
RAPKNDNRKRKVIFDFSDDEYEDVISLASPSSPKVNSRPDVELSSEDSGPEKPDADREIK
SEEPEVSKEDRQKTACTTLSMEKIQAIGSEAKVNPSKGRTTEVPSSPKRKKVLKSRIDDR
GREVTEVVWEETETLPKKKEDTDTSKKLNDGKSANAVNRAVVQKKSPAMGNTAATNAGGK
AGSKKGGNAKDPKQGNIMSFFKKV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgactcacaccgaaaccctaaatattctcgatgaaatcgaatcgcttgtctccgatcag
cttcaagtggtatcttacaaatggttgagtcgaaatttctcgctttcatcaaatactgcc
aagaggttgctcaaggattttgtagagaaacaagggaagggtttggaagttgtatatatt
gtgtctgggttgctaaagaacggaccttcgaattaccacgcaaggcttgcttctagcacc
gaacttccagaagtggagaaagagttcaatggaaaatattcagtacatatctacagtgtt
caagctagtattccaatggatccagcagccatatggaacactgagtttgtgcaagcagaa
gaactcttcaggcagcattcagccattgataattgcttgaaaggcaacaggttttgtggc
gtctccaattcttgtgtaaagcgcaatatagagggaaccactggaaatgttacggccccg
cgaactgaaattgtgagaactacaggacgatctaatagtagtttaaattttcaaaagagt
acattgccgtcaaaccaggaaaagaattttcagcactcaagccataatgttgtccatcag
gctaagagtgaaactactgctgctccagctaaaaatcagtctgcgaaatcctctttggat
aaagaaaaagcttttcctgtgcccgctaataaaaagaatggacagggcgaaaagaaggtg
actggaactggtggtttgttgaaaaatatgtggggccgtgtgcctatgaaaacagaagat
gatactccaacagtagaggtcaaaaattatattactgatcattcggaagccgaaaaacct
tctcatgataccgacaataagggaggcagcgatgatgagactcgagatgtcaatttcatg
agagcgcctaaaaatgataacagaaaaaggaaggtgatatttgatttttcagatgacgag
tatgaagatgtaatcagcttagcatctcctagtagtccaaaggttaattcacgtccagat
gtggaactcagttccgaagattcaggtccagagaagcctgatgcagatcgagagataaaa
tctgaggaaccagaggtcagcaaagaagacaggcaaaaaactgcttgtactactttgtca
atggagaagatccaggccattggttctgaagctaaagtgaatccctcaaagggaagaact
actgaagttcctagttcaccgaaaaggaaaaaggtgttgaagtcacggattgatgatcgt
gggagagaagtaactgaggtagtgtgggaggagacagaaacgcttccaaagaagaaagag
gacactgatacaagtaagaagttaaatgatggcaaaagcgcaaatgctgttaacagggcg
gttgtgcagaagaagagcccagccatgggaaacacagcagccacaaacgcaggaggaaaa
gcaggaagcaagaaaggcggaaacgccaaagatccaaagcaagggaatataatgtccttc
ttcaagaaagtttaa
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