Arabidopsis lyrata (lyrate rockcress): 9325294 Help Entry 9325294           CDS       T01578                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03018   RNA degradation Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     9325294  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aly03019]     9325294 Messenger RNA biogenesis [BR:aly03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      9325294   mRNA degradation factors    5'-3' decay     Decapping complex      9325294 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  9325294 NCBI-ProteinID:  XP_002889231 UniProt:  D7KVY1 LinkDB All DBs Position Unknown AA seq 788 aa AA seqDB search MDAFGIGSPVTEDPKKFGDNPSGNTMFDASQYAFFGNDVVEEVELGGLEEEDEILSFTGI AEDFLFDKEEVEDSRLLSDVDDLASTFSKLNREPDVYRSTGPITDRRSIQNSLAAEWTHG EELPNWYGRPILDSDAIKDDKAWSAQPFSSLDLVEQRNPDRTKLYPEPQRQLHQDHNQQQ FSSEPILVPKSSFVSYPPPGSISPDQRLGHPNIPYQSGGPQMGSPNFSPFPTLQPQLPTM HHGSPQHAGNRPQFCPALPLNNRPPSQWMNRQNMHPGDSSGIMNNAMLQQPPHQNGLMPP QMQGSQNRLPHPMQPPLGHMPGMQPQLFNSHLSRSSSSGNYDGMLGFGDLREARPGSGHG NRQNMRFQQQGFDTGIQRRYPFRSKYMSAGEIENILRMQLVATHSNDPYVDDYYHQACLA KKSAGAKLKHHFCPNHLRDLQQRARTNNEPHAFLQVEALGRVPFSSIRRPRPLLEVGPPN SAKSGNAEHTDKPLDQEPMLAARVYIEDGLCLLLEVDDIDRFLEFNQLQDGGNQLKQRRQ SLLQNLAASLQLGDPLAKNGQSRSHDDFLFLRIISLPKGRKLLIRYLQLIFPGSDLMRIV CMAIFRHLRSLFGVLSSDPDIMKTTNKLAKVINVCIQNMELGPVSTCLAAVSCSSEQAPL RPLGSPVGDGASMVLKSTLDRASELIRANNFNNTGMALWRASFNEFFNMLMRYCISKYDS IMQSLNSQLPPQFATEISDAAAQAIVREMPIELLRSSFPHIDEQQKRILMEFLKRSMLGS QKTEPVLS NT seq 2367 nt NT seq  +upstreamnt  +downstreamnt atggacgcttttggaatcgggagtcccgtgactgaggatcctaagaaatttggagataat ccttcaggtaatacaatgtttgatgcatctcagtatgccttttttgggaacgatgttgtc gaggaggttgagctgggtggattggaggaggaagatgagattttgtctttcactggaata gcagaagactttttatttgataaggaagaggttgaagattctagacttctgtctgacgtt gatgatcttgctagtactttttcaaagttgaatagggaacctgatgtatatagaagtacg gggccaatcaccgataggcgatcaatacagaattctctagctgctgagtggacccatggg gaggagttgccaaattggtacggccggccaatactggactctgatgccattaaagatgac aaggcgtggtcagcacagcctttttcatctctggaccttgttgagcagagaaaccctgac agaacaaaattgtatccagaaccacagcgtcaactgcatcaagaccataatcaacaacag ttttccagcgaaccaattcttgtcccgaagtcatcttttgtttcataccctcctccaggc agcatatcacctgatcagcgtttaggacaccctaatataccatatcaatctggtgggcct caaatgggatcgccaaacttctctccttttccaactttgcagcctcagttgcctaccatg catcatggatcaccgcagcatgctggaaacaggcctcagttttgtcctgctcttcctctg aataatcgccctccatctcaatggatgaatcgtcaaaatatgcatcctggggatagttcc gggatcatgaataatgcgatgctacaacagccacctcatcaaaacggtttgatgcctcca cagatgcagggctctcagaataggttaccacatccgatgcagcctcctcttgggcatatg ccaggaatgcagcctcagttatttaattcccatctttctcgatcatcttcatctggaaat tatgatggaatgcttgggtttggtgatctgagggaagcaagaccaggatcaggtcatggg aacagacagaacatgcgttttcaacaacaaggctttgatactggcattcagagaagatat ccattccggtctaaatatatgtcagctggtgagatagagaatatactgagaatgcagctt gttgctacacacagcaatgatccttacgttgatgattactatcaccaagcctgtcttgct aagaaatctgcaggtgcaaaactgaagcatcatttctgtccaaatcatttgagggacctc caacagcgtgcacggacaaacaacgagcctcatgcttttcttcaggttgaggctcttggt agggttcctttctcttcaatccgcaggcctcgtcctcttcttgaagtgggccctccaaat tcagctaaatctggtaatgcagagcataccgataagccccttgatcaagaaccgatgctt gcagctagagtgtacattgaggatggtctttgtctcctccttgaagttgatgatatagat cgtttcttggagttcaaccaactccaggacggaggaaaccagttgaaacaaagacgacag tcattgttgcagaaccttgcggcttcacttcagctcggtgatcccctcgccaagaatggg caaagccggtctcatgatgattttctctttctaaggattatctctcttccaaagggtcgg aagctccttataaggtatcttcagctaattttccctggcagcgacctaatgcggatagtt tgcatggccattttccgtcatttaaggtcattgttcggagttctttcatctgaccccgat atcatgaaaaccacaaataagcttgcaaaagttatcaatgtgtgcattcaaaacatggag ttaggaccggtaagcacgtgtctagcagcggtgtcttgttcttctgagcaggcaccgctc cgccccttaggcagtcctgttggagacggagcttccatggtactgaaatcaacactcgac agagcttcggagcttattcgggctaataatttcaacaacacagggatggctctatggcgc gcttcctttaacgagttctttaatatgttgatgaggtactgcatcagcaaatatgatagc atcatgcagagtttgaattcacaattgccaccgcagtttgctactgagatatctgatgca gctgcacaagccattgtccgcgaaatgccaatagagcttctacgttcaagtttcccacac attgatgagcagcaaaagagaatactaatggagtttttgaaacgatctatgctcggaagc cagaaaaccgagccagtcttaagttga

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