KEGG   Arabidopsis lyrata (lyrate rockcress): 9325317
Entry
9325317           CDS       T01578                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 12, chloroplastic isoform X1
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:aly01002]
    9325317
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:aly03110]
    9325317
Peptidases and inhibitors [BR:aly01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   9325317
Chaperones and folding catalysts [BR:aly03110]
 Other chaperones and cochaperones
  AAA proteases
   9325317
SSDB
Motif
Pfam: AAA Peptidase_M41 AAA_lid_3 DUF5906 TIP49 AAA_16 RuvB_N AAA_17 AAA_5 AAA_22 ATPase AAA_28 nSTAND3 AAA_18 AAA_33 AAA_14 RNA_helicase TsaE Sigma54_activ_2 AAA_lid_PRS2_C Mg_chelatase
Other DBs
NCBI-GeneID: 9325317
NCBI-ProteinID: XP_020865651
LinkDB
Position
Unknown
AA seq 1004 aa
MEIAISYKPNPLISSSTQLLKRHESSGLVRFPSKYGLGATRKKQLFRVYASESSSGSSSN
NDGGFSWVRLAQSIRVGAERIGEKIGESVKKGIGFDSEEASARVDEYVGRVKDSVHELNR
FKTETVPSFIDWNKWEHWKDIRNWDGKRVAALFIYAFALLFSCQRVYVAIQAPRVEQERR
ELTESFMEALIPEPSPGNIEKFKRNMWRKTTPKGLKLKRFIEAPDGTLVHDSSYVGENAW
DEDLETTEGSLKKIIDRNARIQTEAKKKLSQDLGVSGEIGDSVGTWRERLATWKEMLERE
KISEQLNSSTAKYVVEFDMKEVEKSLRKDVIERTSETEGTRALWISKRWWRYRPKLPYTY
FLQKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYIVDIPLDPYLFETICNAGVEVDLLQK
RQIHYFMKVFIALLPGILILWFIRESAMLLLITSKRFLYKKYNQLFDMAYAENFILPVGD
VSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFAR
TLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKD
PRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYI
GLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSY
IYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFD
WHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGDDVTD
GGKDDLEKITKIAREMVISPQNARLGLTQLVKKIGMVDLPDNPDGELIKYRWDHPHVLPA
DMSVEVSELFTRELTRYIEETEELAMNALRANRHILDLITRELLEKSRITGLEVEEKMKD
LSLLMFEDFVKPFQINPDDEELLPHKDRVSYQPVDLRAAPLHRS
NT seq 3015 nt   +upstreamnt  +downstreamnt
atggagattgcaatttcgtataagccgaatccgcttatctcttcgtcgacccaattgttg
aaaagacatgaaagttctggtcttgttcggtttccctccaagtatggactgggagctacc
cggaaaaaacagctctttcgagtctatgcgtctgaaagtagtagtgggtcttcatctaat
aacgatggaggcttttcgtgggtgagattggcgcagtctattcgcgttggtgcggagcgg
attggggagaagattggagagtctgtgaagaagggaattgggtttgactcggaagaagca
agtgcgagagtggatgagtatgtgggtcgagttaaggatagtgtgcacgagttgaatcgc
tttaagactgaaacagtgccttcgtttattgattggaacaagtgggagcattggaaggac
attaggaattgggacggtaaacgagttgctgccttattcatatatgcttttgcgctgtta
ttctcttgtcaaagagtttatgttgccatccaagctcctcgagtggaacaagagagaaga
gagttaacagagtcttttatggaggctttgatccccgagccatctcctggcaatatagaa
aagtttaagagaaatatgtggaggaaaacaacacctaaaggcttgaaactaaaaaggttc
attgaagcgcctgatggaacgcttgtccacgatagttcttatgttggagaaaatgcgtgg
gatgaggatctagagaccacggagggatctctcaagaaaataattgatagaaatgctagg
attcagacagaggcaaaaaagaaactaagccaagatcttggtgtctctggtgaaattgga
gacagtgtaggtacttggcgggaaaggcttgcaacctggaaggaaatgttagaacgagaa
aaaatatcagaacagttaaactcctcaacggcaaagtatgttgttgaatttgatatgaaa
gaggtagagaaaagtcttcgcaaagatgttattgaaaggacatctgaaactgagggaact
agagctctctggatatcaaagagatggtggcgatatcgccctaagcttccctatacctac
ttccttcagaagcttgattcttctgaggttgcagctgttgtcttcacggaagacctaaag
agattgtatgtgaccatgaaagaaggcttccctttagaatatattgttgacattccctta
gatccttacttgtttgagactatttgcaatgccggagttgaggtggatcttcttcaaaag
aggcagatccactacttcatgaaagtgttcattgcacttctgccggggatactaatttta
tggtttataagagaatctgccatgcttctcctcatcacatcaaagcgctttctctacaag
aagtataatcagctgtttgatatggcttatgcagaaaattttatattgccggttggagat
gtcagtgagacaaaatcaatgtataaggaagtggtactaggtggtgatgtttgggatctt
cttgatgagctaatgatctacatgggaaacccaatgcaatactatgaaaaagatgtggct
tttgtcaggggtgtgcttctttctggacctcctggaactggaaaaacactttttgcgcga
acacttgcaaaggaaagtgggctaccatttgtgtttgcatctggtgcggagttcacagac
agtgaaaaaagtggtgctgcaaagatcaatgagatgttttcaatcgcgagacgaaatgca
cctgcttttgtgtttgtggatgaaatagatgctattgctggtagacatgctagaaaagat
ccgcgaagaagagcaacttttgaagctttaattgcgcagctcgacggggagaaggaaaag
acaggtatcgataggttttctttgagacaagctgtgatatttatctgtgctaccaatagg
cctgatgaactcgaccttgagtttgtccgttctggacgtattgaccgtcgcctgtatatt
ggtttgcctgatgcaaaacaaagggtgcaaatatttggtgttcacagtgccgggaagaac
cttgcagaagatatagacttcggaaagcttgtttttcgtacggttggcttttccggggca
gatatccggaatcttgttaacgaagcagctataatgtcggtaaggaagggacgttcttac
atatatcaacaagacattgttgatgttttagataaacaattgctcgagggtatgggtgtg
cttcttacagaggaagagcaacaaaaatgtgaacaaagtgtatcttacgaaaagaagaga
ctcctggctgttcatgaggctggtcatatagtgttggctcatttgtttcctcgatttgac
tggcatgcattttcgcagctccttcctggtggaaaggaaactgctgtatcggttttctat
ccacgtgaagacatggtcgaccaaggttataccacgtttggttatatgaaaatgcaaatg
gtggtagctcatggtggacgctgtgctgaacgtgtggtttttggcgacgatgtcactgat
ggaggaaaagatgacctggagaagataacaaaaattgccagggagatggtgattagcccc
caaaatgcgagattaggtctcactcaacttgtaaaaaagattggaatggtggatttacca
gataacccagacggtgagctgataaaataccggtgggaccatcctcatgtactgccagca
gatatgtcggttgaagtatccgagctattcacccgtgagttgacaaggtatattgaggag
actgaagaacttgcaatgaatgctctgagagcaaacagacacattctggacttgatcacc
agagagttattggaaaagtcaaggattactggattggaagtggaagagaaaatgaaggat
ctttctctgttaatgtttgaggactttgtgaagccattccagataaaccctgatgatgag
gaacttttacctcacaaggatcgagtgagctatcagccagttgatttacgtgctgcgcca
ctccacagaagctag

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