Arabidopsis lyrata (lyrate rockcress): 9325513
Help
Entry
9325513 CDS
T01578
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
9325513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9325513
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
9325513
Prokaryotic type
Archaeal type
TFE
9325513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7836
Cue1_U7BR
DUF8255
wHTH-PRTase_assc
Zn_ribbon_8
DZR
Motif
Other DBs
NCBI-GeneID:
9325513
NCBI-ProteinID:
XP_002889449
UniProt:
D7KCD4
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MEKSGPVQKAVVLQPFVKLVRLVARAFYDDYTTKSDNQQKSARSDNRGIAAVVLDALARR
QWVREEDLAKDLQLHAKQLRKIIRLFEEEKLIMRDHRKETAKGAKMYSAAVAATTDGRAE
DKVKLHTHSYCCLDYAQICDVVRFRLHRMKKRLKDELEDKNTVQEYGCPNCQRKYNALDA
LRLISMEDDSFHCENCNGELVVECNKLTSEEVVDGDDNARRRRREKLKNMLQKLEVQMKP
LMDQLNRVKDLPIPEFGSFLAWEARAAMAARANGDLNPNDPLRSQSGYGSTPMPFLGETK
VEVNLGDGNEDVKSKGGDSSLKVLPPWMIKEGMNLTEEQRGEMRQEAKVDGGSRGAAKLS
EDKKSASGNGDEKDLKDEYLKAYYLELLKQQELAARRNQQESAGESASDIQLGTTSSGRQ
VSMKAKREEEDEDEDEEDVEWEEKAPVAANGNYKVDLNVEAEASGGEEEEEEDDIDWEEG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcaggccctgtgcagaaagccgttgtgctccagccatttgtcaagctggtg
aggcttgtcgcgagggctttctatgatgattatactacgaaaagcgataatcagcagaaa
tctgcaagaagtgacaacagagggattgccgctgtggtgctagacgccctggcgaggcgg
caatgggttagagaagaagatttggcaaaagatttgcaattgcacgccaagcaacttcga
aaaataataagactctttgaagaagaaaagttgattatgcgtgaccaccggaaagagact
gcaaagggggcaaagatgtatagtgctgcagtggctgctacaactgatggccgagcagag
gacaaagttaagcttcacacccactcgtattgttgtctcgattatgcacagatatgtgat
gttgttcgttttagactgcatcggatgaaaaaaaggctcaaagatgagctagaagataag
aatactgttcaggagtatggctgtcctaactgccaaagaaaatataatgcgctggatgct
ctgagattaatttctatggaagacgattcttttcattgtgaaaattgcaatggtgaactt
gttgtggaatgtaacaagctaacttccgaagaagttgttgatggagatgataatgctagg
agacggcggcgggaaaaactaaaaaatatgcttcagaagttggaggttcaaatgaaacct
ctgatggatcagttaaatagagtaaaagacctaccaattcctgaatttggatcttttctg
gcatgggaggctcgtgcagctatggctgctcgcgcgaatggtgatcttaaccctaatgat
cctttgaggtcacagagtgggtatggttcaacaccaatgccatttctcggagagacaaag
gttgaggttaaccttggcgatggaaacgaagatgttaaatctaaaggtggagattccagt
ctgaaagtcttgcctccatggatgatcaaggaaggaatgaatctgaccgaagaacaaaga
ggagagatgagacaggaagcaaaggttgatggtggctcaagaggagcagcaaaactttca
gaagacaagaaatcagccagtggaaatggagatgagaaggatttgaaggatgagtatctc
aaagcttactacttagaacttctgaagcagcaagagcttgctgcaagacgaaatcaacaa
gaatccgctggggaatcagcttctgacatccagttgggtactacatcctcaggtcgtcag
gttagtatgaaggccaaacgtgaagaagaagatgaagacgaagatgaagaagatgttgaa
tgggaagaaaaggctcctgttgcagctaatggaaactacaaggtggacttgaatgtggaa
gcagaagcttcgggtggtgaagaagaagaagaggaagacgacatcgattgggaagaaggc
tga
DBGET
integrated database retrieval system
