Arabidopsis lyrata (lyrate rockcress): 9325797
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Entry
9325797 CDS
T01578
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37b
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03060
Protein export
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
9325797
04141 Protein processing in endoplasmic reticulum
9325797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aly03110
]
9325797
04131 Membrane trafficking [BR:
aly04131
]
9325797
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9325797
Enzymes [BR:
aly01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
9325797
Chaperones and folding catalysts [BR:
aly03110
]
Heat shock proteins
HSP70 / DNAK
9325797
Membrane trafficking [BR:
aly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
9325797
Autophagy
ER-phagy
ER stress-related proteins
9325797
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
9325797
Exosomal proteins of other body fluids (saliva and urine)
9325797
Exosomal proteins of colorectal cancer cells
9325797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Radial_spoke_3
FGGY_C
DUF7357
ParM_N
GP46
Motif
Other DBs
NCBI-GeneID:
9325797
NCBI-ProteinID:
XP_020867125
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MSSVAIESEEQKLGTVIGIDLGTTYSCVGVYHNKHVEIIANDQGNRITPSWVAFTDTERL
IGEAAKNQAAKNPERTIFDPKRLIGRKFDDPDVQRDIKFLPYKVVNKDGKPYIQVKVKGE
EKVFSPEEISAMILTKMKETAEAFLGKKIKDAVITVPAYFNDAQRQATKDAGAIAGLNVV
RIINEPTGAAIAYGLDKKGGESNILVYDLGGGTFDVSILTIDNGVFEVLSTSGDTHLGGE
DFDHRVMDYFIKLVKKKYNKDISKDHKALGKLRRECELAKRSLSNQHQVRVEIESLFDGV
DFSEPLTRARFEELNMDLFKKTMEPVKKALKDAGLKKSQIDEIVLVGGSTRIPKVQQMLK
DFFEGKEASKGTNPDEAVAYGAAVQGGVLSGEGGEETQNILLLDVAPLSLGIETVGGVMT
NIIPRNTAIPTKKSQVFTTYQDQQTTVSINVYEGERSMTKDNRELGKFDLTGILPAPRGV
PQIEVTFEVDANGILQVKAEDKVVKTSQSITITNDKGRLTEEEIEEMIREAEEFAEEDRI
MKEKIDARNKLETYVYNMKSTMADKEKISDEDKEKMEEVLKEALEWLEENVNAEKEDYDD
KMKEVESVCNPVIKSVYEKTGGESEDGGGDDHDEL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgtggcaatagaaagcgaagagcagaaactggggacggtgataggaatcgat
ctagggactacatattcatgtgttggtgtgtatcataacaaacatgtggaaatcatagca
aacgatcagggaaacagaattacaccatcttgggtggcttttactgataccgaacgtctc
atcggggaagctgctaagaatcaagcagccaagaacccggagcgaaccatcttcgacccg
aaacgtctgattggaagaaaatttgatgatcctgatgtacaaagggatatcaaattcttg
ccatacaaggttgtgaacaaagatggaaagccttacattcaagtgaaggttaaaggtgaa
gagaaagtgtttagccctgaggaaataagtgctatgatactaaccaagatgaaagagaca
gctgaagctttcttgggaaagaagatcaaagatgctgtcatcacggttccagcgtatttc
aatgatgcgcagaggcaagccacaaaggatgcaggggcaatcgcggggcttaatgtggtt
cgtataatcaatgagccaacgggtgcagccatagcttatggtttagacaaaaaaggtggg
gagtcaaacattcttgtatatgatctaggtggaggaacatttgatgttagtatccttacc
atagacaatggagtctttgaagtcttatccacaagcggagacactcaccttggtggagaa
gattttgaccacagagtgatggactatttcatcaaattggtcaagaagaagtataacaaa
gacattagcaaggatcacaaagcgcttggtaaacttaggcgcgaatgtgagcttgcgaaa
cgatctttgagcaaccagcaccaagtccgtgttgaaattgagtcactctttgatggagtt
gatttctctgagcctttaacgagagcaagattcgaggaactcaacatggacttgttcaag
aagactatggagccagtaaagaaggctcttaaagatgcagggttaaagaaatcccaaatt
gacgagattgttcttgttggaggaagcactcgaatcccaaaagttcagcagatgttgaag
gatttctttgaaggcaaggaagccagcaaagggactaaccctgatgaggctgtggcctat
ggagccgcggtccaaggtggagtattaagtggtgaaggtggagaagaaacacaaaatatt
ctgctgcttgatgttgcgcctttgagcctcggtattgaaactgtcggaggcgtgatgaca
aacattattccgaggaacactgcgatcccaacgaagaagtctcaggtgttcacgacttac
caagatcagcaaactactgtgagcattaacgtctatgaaggcgagagaagcatgactaaa
gataaccgcgagctcggaaaattcgatctcacaggcattcttcctgcacccaggggagtg
ccacagattgaggtgactttcgaagtagacgcaaatgggatccttcaggtgaaagccgaa
gacaaagttgtaaagacgtcacagtcgattacaataacgaacgataaaggtcgtttaaca
gaagaagagattgaggaaatgattagagaagcagaggagtttgctgaggaagataggatt
atgaaggagaagattgatgcgaggaacaagcttgaaacgtatgtgtacaacatgaaaagt
acaatggccgataaggagaagataagtgatgaggataaagaaaagatggaagaggttttg
aaggaggcgttggagtggttagaagagaatgtgaatgcagagaaggaagattacgatgat
aaaatgaaggaggtggagtcggtttgtaacccggttattaagtcggtttacgagaaaacc
gggggagagagtgaagacggcggtggagatgatcatgatgagttatag
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integrated database retrieval system
