KEGG   Arabidopsis lyrata (lyrate rockcress): 9325859
Entry
9325859           CDS       T01578                                 
Name
(RefSeq) SKP1-like protein 18
  KO
K03094  S-phase kinase-associated protein 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03083  Polycomb repressive complex
aly04120  Ubiquitin mediated proteolysis
aly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    9325859
   04120 Ubiquitin mediated proteolysis
    9325859
  09126 Chromosome
   03083 Polycomb repressive complex
    9325859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9325859
   04121 Ubiquitin system [BR:aly04121]
    9325859
   03036 Chromosome and associated proteins [BR:aly03036]
    9325859
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    9325859
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     9325859
   Cul7 complex
     9325859
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     9325859
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     9325859
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 9325859
NCBI-ProteinID: XP_020867590
LinkDB
Position
Unknown
AA seq 180 aa
MSSSKKSSDGKSSEIEEAVASLTMPFNKILLTSSDGESFEIDEAVARKFQIIAHMIEDDC
AGKAIPIDNVTGDILSKIIEYAKKHVVEPDEDEDEEAKKKLDSWDAKFVEKLDLETIFKI
ILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEAIRKENAWTFNG
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtcttcttcgaaaaagagctccgacggcaaatcttccgagatagaggaagcggtggcg
agtctaaccatgccttttaacaagattttgttgacgagttccgatggcgagtctttcgag
atcgacgaagcggtggcgcgtaagtttcagatcatagcgcacatgatcgaagatgactgc
gccggcaaagcaattccgattgacaacgtcaccggagatatcctctctaagataatcgag
tacgcgaagaagcacgtcgttgaacctgatgaagacgaagacgaggaggcgaagaagaag
ctggattcgtgggacgctaagttcgtggaaaagctagatctggagacgatcttcaaaatc
attctcgctgccaactacctaaacttcgaaggacttctcggtttcgctagccagacggtt
gctgattacatcaaggacaaaactccggaggaagttcgagagatcttcaacatcgagaac
gatttcacacctgaagaagaagaagcgattcgtaaggagaacgcttggacttttaatggt
tga

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