Arabidopsis lyrata (lyrate rockcress): 9326051
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Entry
9326051 CDS
T01578
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9326051
03015 mRNA surveillance pathway
9326051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9326051
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
9326051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
DUF5427
Motif
Other DBs
NCBI-GeneID:
9326051
NCBI-ProteinID:
XP_020870114
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MGIVLEPPCPKSVDGISIDPEPNWNFDSLVAEIESVEKKLNGFSMFPQPITNTTLRIGRS
GGGFVMRVSDEEMESDDVEEEEEEEDHSQICTAGKRFACDELYLSDESDDEFDHEPEYMM
NKMGLAESALYEVINDHQTEIKDDIRNQVSVVETEIMNEIETSRSAIARVEKYSETRKEV
ERKLDLQYQRKVAEALDTHLTAVQREHKIKSQIEERKIRSEEAQEEARRKERAHQEEKIS
QEKAHAEAEMLAKIRAEEEKKEVERKAAKEVAEKEVADRKAAEQKLAEQKAVIESVTGGS
ATSNAQAGGKSIRAAENALTLENHRLKKLEELETMNQSLKSRSNENFSSFEKHIGRVIRQ
ISGTKDSVSGKINEIVKIFKDPRCPVSISIAAFAKKMVTTKEKPNPFASSYVIVYITSQF
PQAMDILLAEFHKACIYTVPKHIINSQSAWDSDAYERLDSIMRLYGALVQTDIRGGNATN
VHGIEHGWAWLARFLNKIPANRATATALNSFLQTAGFGLHQRYKSQFVKVVNVVREHFLQ
KLKAKKDTSDLLLIIAEITAYLDDRMYLKEPEGRSMKTTSTLSSEYTAEINQQNDNQNYK
NNYYRGYY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgttttggaacctccttgtcctaaaagcgttgatgggattagcattgaccct
gagcctaattggaatttcgatagtttggtcgctgagatcgagtctgttgaaaagaagctc
aatggcttctcaatgtttccccagccaattactaacactaccttaaggataggaaggagt
ggtggaggatttgtgatgcgtgtatcagatgaagagatggagagtgatgatgtagaagaa
gaagaagaagaagaagatcatagtcaaatctgtacagcggggaaacgttttgcctgtgat
gagctttatttgagtgatgaatctgatgatgagtttgatcatgaacctgagtatatgatg
aataaaatgggtctggctgagagtgccctatatgaggttatcaatgaccaccaaaccgaa
attaaggacgacattaggaatcaagtatcagttgttgaaacggaaataatgaatgagatt
gaaacgtctcgctctgccatagcccgggttgaaaagtacagtgaaactcgaaaagaagtt
gaacggaaacttgatcttcaatatcagcgaaaagttgctgaagcacttgatacccatctg
actgcagtccaacgtgaacataaaattaaatcgcaaatagaagaaagaaagataaggagc
gaggaagctcaggaggaggccaggaggaaggaaagggctcatcaagaagagaaaataagt
caagaaaaagctcacgcagaggctgaaatgctagcaaaaatcagagctgaagaagaaaag
aaagaagttgagagaaaggcagccaaagaagtagctgaaaaagaagtagcagatcgcaaa
gctgccgaacaaaaacttgcggaacagaaggctgtgatagagagtgttacggggggttca
gctacatcaaatgctcaagctgggggtaaatcaatccgagctgcagaaaatgctttgaca
ttggagaaccacagattgaaaaagctcgaagaattagaaacaatgaaccaatcgctaaag
tcacgttcaaatgagaactttagcagttttgaaaagcatattggaagggttataaggcaa
ataagtgggacaaaggatagtgtaagtgggaaaatcaatgaaattgtcaaaatatttaaa
gaccctcgttgtccggtatccataagtattgcagcttttgcaaagaagatggtcaccact
aaggagaaaccaaacccttttgcatccagctatgtcattgtttacatcacctcccagttt
ccacaagctatggatattcttcttgctgaattccacaaagcttgcatttacactgttcca
aagcatattataaactcacagtcagcgtgggattcagacgcatatgaacgcctagattct
ataatgaggctctacggtgcacttgttcagaccgatatccgcggtggcaatgctaccaac
gttcatgggatcgaacatggatgggcttggttagcccggtttcttaacaaaatcccagcc
aacagagccactgcaacagccttgaactcctttctccagacggcagggtttggtcttcat
cagcggtacaaatctcagtttgtgaaggttgtgaatgttgtgagagagcatttcttacag
aaattgaaggcgaaaaaggacacgtctgatctactattgatcatagccgaaatcacagcg
tacttagatgaccggatgtatctcaaggaacctgaaggaagaagtatgaagacgacgagt
accttgtcctccgaatatactgctgaaataaatcaacagaacgacaatcagaattacaag
aataattattacagaggctactattga
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