KEGG   Arabidopsis lyrata (lyrate rockcress): 9326051
Entry
9326051           CDS       T01578                                 
Name
(RefSeq) protein GLE1 isoform X1
  KO
K18723  nucleoporin GLE1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013  Nucleocytoplasmic transport
aly03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    9326051
   03015 mRNA surveillance pathway
    9326051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9326051
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     9326051
SSDB
Motif
Pfam: GLE1 DUF5427
Other DBs
NCBI-GeneID: 9326051
NCBI-ProteinID: XP_020870114
LinkDB
Position
Unknown
AA seq 608 aa
MGIVLEPPCPKSVDGISIDPEPNWNFDSLVAEIESVEKKLNGFSMFPQPITNTTLRIGRS
GGGFVMRVSDEEMESDDVEEEEEEEDHSQICTAGKRFACDELYLSDESDDEFDHEPEYMM
NKMGLAESALYEVINDHQTEIKDDIRNQVSVVETEIMNEIETSRSAIARVEKYSETRKEV
ERKLDLQYQRKVAEALDTHLTAVQREHKIKSQIEERKIRSEEAQEEARRKERAHQEEKIS
QEKAHAEAEMLAKIRAEEEKKEVERKAAKEVAEKEVADRKAAEQKLAEQKAVIESVTGGS
ATSNAQAGGKSIRAAENALTLENHRLKKLEELETMNQSLKSRSNENFSSFEKHIGRVIRQ
ISGTKDSVSGKINEIVKIFKDPRCPVSISIAAFAKKMVTTKEKPNPFASSYVIVYITSQF
PQAMDILLAEFHKACIYTVPKHIINSQSAWDSDAYERLDSIMRLYGALVQTDIRGGNATN
VHGIEHGWAWLARFLNKIPANRATATALNSFLQTAGFGLHQRYKSQFVKVVNVVREHFLQ
KLKAKKDTSDLLLIIAEITAYLDDRMYLKEPEGRSMKTTSTLSSEYTAEINQQNDNQNYK
NNYYRGYY
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgggaattgttttggaacctccttgtcctaaaagcgttgatgggattagcattgaccct
gagcctaattggaatttcgatagtttggtcgctgagatcgagtctgttgaaaagaagctc
aatggcttctcaatgtttccccagccaattactaacactaccttaaggataggaaggagt
ggtggaggatttgtgatgcgtgtatcagatgaagagatggagagtgatgatgtagaagaa
gaagaagaagaagaagatcatagtcaaatctgtacagcggggaaacgttttgcctgtgat
gagctttatttgagtgatgaatctgatgatgagtttgatcatgaacctgagtatatgatg
aataaaatgggtctggctgagagtgccctatatgaggttatcaatgaccaccaaaccgaa
attaaggacgacattaggaatcaagtatcagttgttgaaacggaaataatgaatgagatt
gaaacgtctcgctctgccatagcccgggttgaaaagtacagtgaaactcgaaaagaagtt
gaacggaaacttgatcttcaatatcagcgaaaagttgctgaagcacttgatacccatctg
actgcagtccaacgtgaacataaaattaaatcgcaaatagaagaaagaaagataaggagc
gaggaagctcaggaggaggccaggaggaaggaaagggctcatcaagaagagaaaataagt
caagaaaaagctcacgcagaggctgaaatgctagcaaaaatcagagctgaagaagaaaag
aaagaagttgagagaaaggcagccaaagaagtagctgaaaaagaagtagcagatcgcaaa
gctgccgaacaaaaacttgcggaacagaaggctgtgatagagagtgttacggggggttca
gctacatcaaatgctcaagctgggggtaaatcaatccgagctgcagaaaatgctttgaca
ttggagaaccacagattgaaaaagctcgaagaattagaaacaatgaaccaatcgctaaag
tcacgttcaaatgagaactttagcagttttgaaaagcatattggaagggttataaggcaa
ataagtgggacaaaggatagtgtaagtgggaaaatcaatgaaattgtcaaaatatttaaa
gaccctcgttgtccggtatccataagtattgcagcttttgcaaagaagatggtcaccact
aaggagaaaccaaacccttttgcatccagctatgtcattgtttacatcacctcccagttt
ccacaagctatggatattcttcttgctgaattccacaaagcttgcatttacactgttcca
aagcatattataaactcacagtcagcgtgggattcagacgcatatgaacgcctagattct
ataatgaggctctacggtgcacttgttcagaccgatatccgcggtggcaatgctaccaac
gttcatgggatcgaacatggatgggcttggttagcccggtttcttaacaaaatcccagcc
aacagagccactgcaacagccttgaactcctttctccagacggcagggtttggtcttcat
cagcggtacaaatctcagtttgtgaaggttgtgaatgttgtgagagagcatttcttacag
aaattgaaggcgaaaaaggacacgtctgatctactattgatcatagccgaaatcacagcg
tacttagatgaccggatgtatctcaaggaacctgaaggaagaagtatgaagacgacgagt
accttgtcctccgaatatactgctgaaataaatcaacagaacgacaatcagaattacaag
aataattattacagaggctactattga

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