Arabidopsis lyrata (lyrate rockcress): 9326127
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Entry
9326127 CDS
T01578
Name
(RefSeq) protein indeterminate-domain 6, chloroplastic isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9326127
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
9326127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
9326127
NCBI-ProteinID:
XP_020869197
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MDLCSFSKIRPAEKMSSSYNTIASSSAQTFLLSGAASGARPNNFNREEAARTMIQQPNSS
VTPPPKKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLP
WKLKQKSNKEVRRKVYLCPEASCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRY
AVQSDWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQESARNPTVSFTAMAPA
AGGGTRNGFYGGASAALSHNHFGNNSNSGFTPLAAGYNLNRSSSDKFEDFVPQSTNPNPG
PTNFLMQCSPNQGLLAQNNQSLMNQHGLISLGDNTNHNLFNIGYFQDTKNSDQIGVPSLF
TNGADNNDPSAFLRGLTSSSSPTVVVNDFGDSDNGNLQGLMNSLAATTDQQGRPTSLLDL
HFGNNLSMGGADRLTLDFLGVNGGIVSTVNGRGGRSGGPPLDAEMKFSHPTHPFGKA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatctttgtagctttagcaaaatccgaccagctgagaagatgtcttcatcgtacaac
acaattgcttcatcctccgctcagaccttcctcctctcaggtgccgcttccggagccaga
ccaaacaactttaaccgtgaagaggctgcgaggaccatgattcaacaacccaactcctcc
gttactccaccacccaagaagcgtaggaaccaacccggaaacccaaatccagatgctgaa
gtgatagcgttatctccaaagacgataatggcgacgaacagattcctatgtgaagtgtgc
aacaaagggttccaaagggaacagaatctgcagcttcacaggaggggacacaaccttcca
tggaagctgaaacaaaagtccaacaaagaagtgaggaggaaggtgtacctttgcccggag
gcctcgtgcgtccaccatgacccggcacgtgctctcggagacctcaccggaatcaagaag
cattactatcggaagcacggtgagaagaagtggaagtgcgacaaatgctctaagcgttac
gctgttcaatctgattggaaagctcactctaagacctgtggtaccaaagagtatcgatgt
gactgtggtaccatcttctctaggagagacagttacattacgcaccgggcattctgtgat
gcactaatacaggagtcagcaagaaaccctaccgtgagcttcacggcaatggcacctgct
gctggtggcggcaccagaaatggcttttacggcggagcttctgctgctctctctcacaac
catttcggcaacaattcaaactccggttttacccctctagctgcaggttacaatctgaac
cgttcatcttccgacaagttcgaagacttcgttcctcagtccacaaaccctaatcccggt
ccgaccaacttcctcatgcaatgctctccgaaccaaggactgttagcccagaacaatcag
agtctcatgaaccagcacggtctgatcagcctcggtgataacaccaaccacaacttgttc
aacatcggatactttcaagacaccaagaactctgatcagataggtgttccttctcttttc
accaatggtgctgataacaacgacccatctgctttccttagagggttaacttcttcatct
tctccaactgtggtcgttaatgactttggagatagtgataatggaaaccttcaaggtctg
atgaactctctagctgcgacaacagatcaacaaggccggcccactagccttctcgacctt
catttcggaaacaatcttagcatgggaggtgcggataggttgactttggactttcttggt
gttaatggaggaattgtgagcaccgtcaatggtcgtggtggtcgtagtggtggacctcct
ctggacgctgagatgaagttttcacacccaactcatccatttggcaaagcttga
DBGET
integrated database retrieval system
