KEGG   Arabidopsis lyrata (lyrate rockcress): 9326129
Entry
9326129           CDS       T01578                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9326129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    9326129
Spliceosome [BR:aly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    9326129
 Complex B
    9326129
 Complex C
   U2 SnRNP specific factors
    9326129
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 9326129
NCBI-ProteinID: XP_002890067
UniProt: D7KBM8
LinkDB
Position
Unknown
AA seq 778 aa
MFNSMQILPLEAPPADGNLGPLPPSQLTDEEIKEKELQTEQNNSIQAPIAVATHTKTIGI
IYPPPDIRKIVETTAHFVSQNGLKFENKVKTEKANNPNFNFLKSDNPYHAFYQHKIAEYC
AQIRDGAQGTDFDDTEDPQLDPAASADESHAKPDLQDQFRVPRKTLEAPEPDKYTVRLPI
GIMEEELDIIKHTAQFVARNGESFLRGLMSREMNNSQFQFMKPTHSMFTFFTSLVDAYSE
VLMPPRDLKEKLRKSVADLTIILERCLNRLEWDRSQEEERKKEEDEKEKERVQMVLIDWH
DFAVVESIEFVYEEDEELPVPMTLEEVIRRSKVSAMEEDEIVEPGKAVEMEMDEEEVKLV
AERMRAANLEEYVGSVEIENVHCEEAPMRIVKNWKRPEDRFLTERDSSKVVISPITGELI
PITEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEE
EVSNAVKAEIEKKDEQPKQLIWDGHTGSIGRTANQALTQNSNGEQGDGVYGDPNSFPGPA
ALPPTRPGVPTVRPLPPPLNLALNLPRPSPSVQYLGAPRPLGVPMMQPMYQQHHLSMTGP
HGHPSMMMNRPPQMQPVMHVPSPPGSQFAQPYGQLPPHSMGMMHVHPPPMPEMPLPPPPG
EAPPPLPEEPETKRQKFDESALVPEDQFLAQHPGPATIRVSKPNENDGQVMEITVQSLSE
NVGSLKEKIAGEMQIPANKQKLSGKTGFLKDNMSLAHYNVGAGEIVTLSLRERGGRKR
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgttcaattcgatgcagatactgccactagaggctcctcctgctgacggtaacctaggt
ccacttcctccgtcgcaattaacggatgaagaaatcaaagagaaagagttgcaaacagag
caaaacaattcaattcaagctcccatagctgtggctactcatacaaagacgatcggaatc
atttatccacctcctgatatcagaaaaatcgtcgagacaacggctcattttgtttcgcaa
aacggtttaaagtttgaaaacaaagttaaaacagagaaagccaataaccctaatttcaac
tttttgaaaagtgataatccttatcatgccttttaccagcacaagatcgctgagtactgt
gctcagattcgagacggagctcaaggtactgattttgatgatacagaagatccccaactt
gatcctgctgcttctgctgatgagtctcatgcaaaacctgaccttcaggatcaatttagg
gttcctcgtaagactttagaagctcctgaacctgacaagtatacagttagacttcctata
gggatcatggaggaggagcttgatattattaagcatacagcgcagtttgtggcgcggaat
ggggaatcatttttaaggggactgatgagtagagagatgaacaattctcagtttcagttt
atgaaaccaacacatagtatgttcacttttttcacttctctggttgatgcgtattcagaa
gtattgatgcctcccagagacttgaaagaaaagctgagaaagagtgtcgctgatttgacg
attattcttgagcgttgtttgaatcggcttgaatgggatcgttctcaggaggaggagagg
aagaaagaagaggatgagaaagagaaggagagagtgcagatggttttgatagattggcat
gattttgcagttgttgagtcgatagaatttgtatacgaggaagatgaagagttgccagtg
cctatgacacttgaggaggttataaggaggagcaaagtttctgccatggaagaagatgaa
attgttgagcctggaaaggcggttgaaatggaaatggatgaagaagaagttaagcttgtt
gcagaaagaatgagagcagcgaacctagaagagtatgttggctctgtggagattgaaaat
gtacactgtgaagaagcaccaatgagaattgttaagaactggaagaggccagaagatagg
tttttgacagagagagattcgagtaaagttgttatatcaccaattactggtgagctcatt
cccattaccgagatgtctgagcacatgaggatttcacttatcgatcctaagttcaaagag
cagaaagatcggatgtttgctaagattcgtgagaccacacttgcacaagatgatgagatt
gctaaaaacatagttgggttggcccgcctgcgtcctgatatctttggaacaacagaagaa
gaagtctcaaatgctgtaaaagcagagattgagaagaaagatgagcaaccaaaacaatta
atatgggatggtcacactggaagtattggtcgcacagcaaaccaagccttgactcagaac
tctaacggagagcaaggcgatggagtttatggtgatcccaatagcttccctggtccagcc
gctcttcctcctactcgaccaggtgtcccaacagtccggccattgccaccacctcttaat
ctcgccttgaacctccctcgtccttctccttctgttcagtaccttggtgcaccaaggcca
ttaggtgttccaatgatgcagcccatgtatcaacaacaccacctctctatgactgggcca
catggacacccttcgatgatgatgaatcgaccaccacaaatgcagcctgttatgcatgtg
ccgtctccaccgggatctcagtttgctcaaccttatggtcagcttccaccgcattcgatg
gggatgatgcacgtgcacccaccacctatgcctgaaatgcctcttccaccaccacccggg
gaggcaccaccgcctcttcctgaggagccagagacaaagagacaaaagttcgatgagtca
gcccttgttccagaagaccagtttcttgctcagcatccgggtccggctacaatcagggtt
tctaagccaaacgagaatgatggacaagtcatggagatcacagtgcagtcgttatctgaa
aacgtgggaagtttgaaggagaaaatagctggggagatgcaaattccagcaaacaaacag
aagttaagtggaaaaactggattcttaaaggacaacatgtcacttgcacattacaatgtg
ggagcaggagaaatcgttacactgtctttgagagaacgtggtgggagaaagagatag

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