Arabidopsis lyrata (lyrate rockcress): 9326203
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Entry
9326203 CDS
T01578
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9326203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9326203
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
9326203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
9326203
NCBI-ProteinID:
XP_020867552
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MMMQRNCFGFNLKNRGGEKKKASKSFREGVKKIRSEGLITIGKSVTRAVFPEDLRITEKK
IFDPQDKTLLIWNRLFVISCILAVSVDPLFFYLPIVDNSGSSCIGIDTKLAVTTTTLRTI
VDVFYLTRMALQFRTAYIAPSSRVFGRGELVIDPAKIAERYLTRYFIVDFLAVLPLPQIA
VWKFLHGSKGSDVLPTKTALLNIVIVQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYY
LLWYMLASHVSVIMYIYKVLRHLFIIVSLSHFRNTFSQITGAFWYMLSVERNDTCWRFAC
KVQPDPRLCVQILYCGSKFVSNRETEWIKTVPELLKSNCSAKADDSKFNYGIYGQAISSG
IVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTFPGEVLFSIAIAIAGLLLFALLIGNMQ
TYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSL
PKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMM
FIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTE
VEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRKNAEL
RRIEEEEEEMGYEYEYDEESDKRPMVITRTESSSRLRSTIFASRFAANALKGHRLRSSES
SKSLMNLQKPPEPDFDAE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgcagcgaaactgtttcggatttaacctaaagaaccgaggaggtgaaaagaag
aaagcatccaaatctttcagggaaggagtcaaaaaaatcagatcagaaggtctaataacc
atcggtaaatcggtaacaagagcagtttttccagaagatttaagaataaccgagaagaaa
atctttgatcctcaagacaaaacacttctcatatggaacagattgttcgtcatttcgtgt
attttagctgtctcagttgatccattgttcttctatcttcccattgtcgataattccgga
agcagctgtatagggattgacacgaaactagctgttacaacgacgacccttagaaccatc
gttgatgtcttttacttaactagaatggctcttcagttccgaacagcttatatagctcct
tcctctcgtgtgtttggtcgtggtgagcttgtgattgatcctgcaaagatcgcggaacgg
tatttaacccgttatttcatcgtcgatttcctagcagtgcttcctttaccgcagattgcg
gtatggaagtttcttcacgggtctaaaggatcagatgtgctaccgacgaaaacggcattg
ttgaacattgtaatcgtgcagtatattccgagattcgtgaggtttattccgttaacatca
gaactgaagaaaactgctggagcttttgctgaaggagcgtgggctggtgctgcttattat
ctcctctggtatatgcttgcaagccacgtaagcgtcattatgtatatatataaggttttg
agacatttatttatcattgtgtcactttctcacttcagaaacacattttcgcagataact
ggagcgttttggtacatgttgtcagtggaacgtaacgatacttgttggagatttgcttgt
aaggtccagccagatccgcgactctgtgttcagattttgtattgtgggagtaaatttgtg
agcaatcgcgaaactgaatggatcaaaacagtccctgagcttctcaagagcaattgttcc
gctaaagcagatgattcaaagtttaactatgggatatatggtcaggcaatatcttcaggc
attgtatcatcaacaacatttttctccaaattctgttattgtctatggtggggtcttcag
aatctcagcacgttaggtcaaggactgcaaacaagtacatttccaggagaggttttgttt
tccattgcgattgctatagctggtcttcttcttttcgcgcttcttattgggaatatgcag
acttatcttcagtcacttactgttcgtctcgaggaaatgaggattaaaagacgcgactcg
gaacagtggatgcatcacaggtcacttccacaaaatttgagggaaagagtcagacgctat
gatcaatacaaatggttagagacaagaggtgtagacgaagaaaacatagttcagagttta
cctaaggatctcagaagagacatcaaacgccatctctgtctaaatttagttaggagggtt
cctctgtttgctaatatggatgaaagattacttgacgcgatctgtgagagattaaagccg
agtctttacacggaaagcacttacattgtgcgtgaaggagacccggttaacgaaatgatg
ttcataatccgaggccggttagagagtgtaacaacagatggaggacgaagcggtttcttc
aacagagggttattgaaagaaggagacttttgtggtgaagagcttctgacatgggcactt
gaccctaaagcaggctcaaacttaccttcttccacaagaacagtgaaggctctaactgaa
gtagaggctttcgctcttgaagctgaagagctgaagtttgtagcaagtcagtttaggaga
cttcatagtcgacaggttcaacaaacatttaggttttactctcagcaatggagaacttgg
gcttcttgcttcatccaagctgcttggcgtcgctattcaagaaggaaaaacgctgaactg
aggcggatagaagaagaagaagaagaaatgggttatgaatatgagtatgatgaagaaagt
gacaagaggcctatggttatcacaagaactgagtcttcttctagactgcgttcaacgata
tttgcatcaagatttgctgctaatgcattgaaagggcacagactaaggagctcagagagt
tcaaagagcttgatgaatctgcaaaagcctccggaacctgattttgatgctgaataa
DBGET
integrated database retrieval system
