Arabidopsis lyrata (lyrate rockcress): 9326234
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Entry
9326234 CDS
T01578
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9326234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9326234
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
9326234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_22
RNA_helicase
AAA_2
AAA_16
AAA_17
AAA_28
AAA_14
IstB_IS21
nSTAND3
AAA_18
NPHP3_N
Parvo_NS1
AAA_33
Mg_chelatase
Viral_helicase1
AAA_3
Cytidylate_kin2
ABC_tran
NB-ARC
Rad17
Bac_DnaA
AAA_11
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
9326234
NCBI-ProteinID:
XP_002890172
UniProt:
D7KEG7
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MMVRRGRGRGRGGGGINRRYLSKVIDSCGNLTTAEDIVDDLRSRHSNFARLTRQVLLLNV
RQVLNARNNKAEEEDDSNNGDEEAAAAKRKKVSSSPSYSSTSEDEDAVYSEKLSPRFDLI
NGSLRDNYAKLNSSLKKPIGSPVEKNVEVETVGNKGRSKMATMGSRKESKGSLSVSGTTG
NGELEVEGDKGPTFKDFGGIRKVLDELERNVLFPILNPEPFRKIGVKPPSGILFHGPPGC
GKTKLANAIANEVGVPFYKISATDVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI
GSKRENQQREMEKRIVTQLLTCMDGPVNKGPESSAGFVLVIGATNRPDALDPALRRSGRF
ECEIALSVPDEDARTEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLEGVANMAGRIAT
KRILDSRKSQLSENGEDDDNSWLRHPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSI
VPDVKWDDVGGLEHLRLEFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKA
VANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCSPCVIFFDEVDALTTSRGKEG
AWVVERLLNQFLVELDGGDRRNVYVIGATNRPDVIDPAFLRPGRFGNLLYVPLPNADERA
SILKAIARKKPIDPSVDLDGIAKMKCEGFSGADLAHLVQKATFQAVEEITTSGEDDDDDI
TDTSQCTIKMTHFEQALSLVSPSVNKQQRRHYQELSVRLQESSGRKP
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaggagaggtcgcggtcgtggtcgtggcggcggaggaataaatcgtagatat
ctgagtaaagttattgattcatgcgggaatttaacaacggcggaggatatcgtcgatgat
ctccgttccaggcacagtaacttcgcccgcttgactcggcaagtgcttctgctcaacgtc
agacaagtccttaatgccagaaacaacaaagctgaagaggaagatgatagcaacaatggc
gatgaggaagctgctgctgctaaaaggaagaaagtgtcttcttctccgtcttattcttcg
acttctgaggacgaggacgctgtttacagcgagaagctgagtccaaggttcgatttgatc
aatggcagtctacgagataactatgccaagctaaacagttccttgaagaaaccaattggg
tcgcctgtggagaagaatgtggaagttgagactgtgggaaacaaaggtagaagtaagatg
gctacaatggggtcgagaaaggagtctaaaggctctctttccgtcagtggaactactggt
aatggtgaattggaagtggagggtgataaaggacctacttttaaagattttggtgggatt
aggaaagtgttggatgaattggagaggaatgttttgttcccgattctcaatcctgaaccg
tttaggaagattggagttaagccaccaagcgggattctatttcatggaccacctggctgt
gggaagaccaagttggctaatgctatagccaatgaagttggtgttccgttttataagatt
tcagctacagatgtggtttctggtgtctctggtgcttctgaagagaatattagagagctc
ttctctaaagcgtataggactgcaccttctattgtgtttatcgatgagattgatgcgatt
ggatcaaagagggaaaatcagcaaagggagatggagaagcggattgtaacgcaattattg
acttgtatggatggacctgttaacaaaggtcctgagtctagtgctggatttgttctcgtc
attggagctacaaataggcctgatgctctggatcctgctttgagaaggagtggacgattt
gaatgtgagatcgctctgagtgttccagatgaagatgcaagaactgagatcctctctgtt
gtagcccagaaacttagactagaagggccctttgacaaaaaaagaatagctcgtttaaca
ccggggtttgttggagccgatttggagggtgttgctaacatggctggcaggatagctaca
aagagaattttggattcaagaaaatctcaactgtctgagaacggtgaagatgatgataat
tcttggctgaggcatccctggccagaagaagagttggaaaaactctttgtcaagatgtct
gattttgaggaagcagtgaatctagttcaagcatctttgacaagagaaggattctctatc
gtgcctgatgtcaagtgggatgatgttggtggacttgagcatctacgacttgaattcaac
cgttatatagtcagacctatcaaaaagcctgatatttataaggcttttggggtagactta
gagacaggatttttactctatggaccacctggttgtggcaagacattgattgcaaaggct
gttgctaacgaggcaggagctaatttcatgcacatcaagggtgcagaacttctaaacaaa
tacgttggagagagcgagcttgctattcggacattgtttcagcgggcccggacatgctca
ccatgtgtaatcttctttgacgaggtggatgctttgacaacaagccgtggcaaagaaggt
gcctgggttgttgagcggcttttaaaccagtttcttgttgagctggacggtggagatagg
cgtaatgtatatgtaattggagctacaaataggccagatgtaattgatcctgcgttcttg
agacccggtaggtttgggaatcttctatacgtacccctccctaacgcggatgaacgtgct
tcaattctaaaagctattgcaaggaagaagcccatagatcctagtgttgatctggatggc
attgcaaagatgaagtgtgaaggtttcagcggcgctgatctagctcacttggtgcaaaaa
gctacattccaggcagtggaggagataacaacttccggtgaagatgatgatgatgatatt
acagatacaagtcagtgtaccattaagatgactcatttcgagcaagccttgtccttagta
tcaccttctgtgaacaaacagcaaagaagacactaccaggaactatcggtaagactccaa
gaaagcagtggaaggaaaccatag
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