KEGG   Arabidopsis lyrata (lyrate rockcress): 9326303
Entry
9326303           CDS       T01578                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9326303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9326303
   03041 Spliceosome [BR:aly03041]
    9326303
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     9326303
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     9326303
Spliceosome [BR:aly03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    9326303
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 9326303
NCBI-ProteinID: XP_020867668
LinkDB
Position
Unknown
AA seq 362 aa
MDYNSDRGYDDSEQLQPSDYEVETFDDRRNGGAAVDTGGIQMKHSIEHRHSSSSMSSPGK
LFVGGVSWETTEETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEE
HVIDDRKVDLKRTVPRGDRDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQ
IMYDHHTGRSRGFGFVTFQTEDSVDRLFSDAKVHELGDKQVDIKRAEPKRTGRDNSFRSY
GASGKYDQEDCYGGKANEDYNMYSGYGGYGGYGAYAGNPMFNAAGFYGYGGGYGYGYGYG
GQMFNMGYGAGGYSHMGGGYGVAAAAAYGGGKVHGNGNSGSSSGKGNGTNGSGPARYHPY
QK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggattataactcagatcgtggttatgatgactctgaacaattacaaccgtcggattat
gaagtggagacctttgatgaccggaggaacggtggtgcagccgttgatactggtgggatt
cagatgaagcattccattgagcatcgtcattcgtcttcatccatgtcttctcctgggaaa
ctattcgtaggtggagtttcttgggaaacaactgaagaaacttttgcgaattactttgga
aagtttggagaagttgtcgactctgtaatcatgacagatagaataactggaaatccaagg
ggatttgggtttgtcacttttgctgattcagctgttgcagagaaagttttggaggaagag
catgtaatagatgaccggaaggtagatctgaaaaggacagttcctagaggggacagggat
actgatatcaaagcggtatcaaagaccaggaaaatctttgttggtggacttccaccactg
ttggaagaagatgaactgaaaaattatttctgtgtatatggtgacataattgagcatcag
atcatgtatgaccaccacacgggaaggtcaaggggatttggttttgtaacctttcagact
gaagattctgttgacagacttttctctgatgcaaaagttcacgagctcggtgacaaacag
gtggacataaaaagggccgaaccaaagagaacagggagagataacagctttcgatcctat
ggtgctagtggcaagtatgatcaggaagattgttatggtgggaaagctaatgaagattac
aatatgtattcgggttatggtggttatggcggttatggagcctacgcagggaatcccatg
tttaacgctgctggattttatggttacggtggtgggtatggctatggttatggctatgga
ggtcaaatgttcaacatgggctatggagctggcggttatagccatatgggtggtggctat
ggtgttgctgccgctgctgcttatggaggtggaaaagttcatggaaacggaaacagcggc
tcaagtagtggcaaaggaaatgggactaatggttctgggccagctcgataccatccttat
caaaagtaa

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