Arabidopsis lyrata (lyrate rockcress): 9326305
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Entry
9326305 CDS
T01578
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9326305
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
9326305
TFIIIC, fungi type
9326305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_2
TPR_14
TPR_8
DUF7017
TPR_16
TPR_20
TPR_1
TPR_CcmH_CycH
TPR_10
ARM_TT21_4th
TPR_17
RIG-I_C
TPR_Slam
TPR_12
BTAD
ARM_TT21_5th
SNAP
ANAPC3
Pes-10
HAT_PRP39_C
TPR_9
HEPN_DZIP3
TPR_11
Motif
Other DBs
NCBI-GeneID:
9326305
NCBI-ProteinID:
XP_020867105
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MEDKGKGVVEGDEGNLEEGPSNMECDKQVLGGDDKDSDEEGLVDDDDDDDDDSDDDDEGD
ELEEEEDDFEAGSEIPNTFERFEYEALAERKRKALADSQRNASNATNISNSTSGVEGFME
FLSSGRRRKSRKYKKKGRRLGSKKEVAPDILKRFREALFLHAHGRDIEALPILVEVIKQA
PAFDIAYYYLSRVSEQLGRAESSSTEALKIAANIKGSKSPFWKLLYERFKEQEDMAVARS
YASKAIQADPDDIPLKYEYADLCLNAGKYREAAETYEQIFRRCPERIETLKWGIEYFLKS
GEGERAASILEDHIKSHSSEVGHDILDLLASVFMQINVHDRALKYIHDVRQIYNVGKELS
SSLKIRQAICHVHLEEMEQAESVLSILPQEAVSEHPELITNLADELTNIGNFHSALKYYL
EVISEPVNNGYLFVKIARCYMSLAEREQAIVFYYKALNELSDTVDIRITLASLLLEDGKR
DEAVLVLSPPENPDPDTAKLKAWWKNRKIRMNLCQIYHSEGMLEDFANTALQLVLKWVWR
RTVKGKRKRLVLSEHQRNKKRRRPRDAQASQLRGGPKKWRKIRATLNETRRIRERAAIKA
HNEDICSESEEEVIKDEEYHRLFVDLCKALASLQRYWEALEIVNLARRLDAKMLPVETKK
ELQSLGAKISCDTMDPKQWFDCVRSVIQQHPYRLNAWNCYYRVISRLGKRASSEAKFMHH
LRSKYRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPDSPLINLCVGAALINLALGF
RLKNRHECLAQGFAFLYNNLRICSDSQEALYNVARAYQHVGLVTLAASYYEKVLAIYEKE
YLMPKLPNEDPNVAEERKPVNCDLRKEAAHNLHLIYKHSGAFDLARQVLKDHCSF
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaagataagggaaagggtgtggtggaaggagatgagggaaacttagaagaaggtcca
agcaatatggaatgtgacaagcaagtacttggtggtgatgataaagacagtgatgaagaa
ggtctggtagatgatgatgatgatgatgatgatgatagtgatgatgatgatgagggagat
gagttagaagaagaagaagatgactttgaagctggaagtgaaattccaaacacgtttgaa
cgatttgagtatgaagctctggctgaaaggaaacgcaaagcactggctgattctcaacgt
aatgctagtaatgctactaacatctcgaatagcacctccggcgtggagggattcatggaa
tttttgtcttctggtcgccgacggaaatccaggaagtataaaaaaaagggtagaagactt
gggtcaaagaaagaagttgcacctgacattctaaagaggtttagggaggctctttttctt
catgcacatggccgtgacattgaggctttacctattttagtagaagttattaagcaagca
ccagctttcgatatagcatactattatctttcacgtgtttctgagcaacttggtagggcc
gaatcatcttctacggaagcattaaagattgctgcaaatatcaaaggttcaaaatcacct
ttttggaaattgctttatgagaggttcaaggaacaagaggacatggcggtagcaaggagt
tatgcttccaaagcaatacaagctgatccagatgatatccctttgaaatatgaatatgct
gacctctgcctaaatgctggaaaatatagagaagctgctgaaacctatgagcaaatattt
cgtcggtgtcctgagagaattgaaacactcaagtgggggatagagtatttccttaaatcc
ggtgagggtgaacgagcagcgagcatcttagaggatcatatcaaatctcattcatctgaa
gtggggcacgatatcttggatttactggcttctgttttcatgcaaattaatgtgcatgat
agagctcttaagtatattcacgatgtgcgccagatttacaatgttggaaaagaactgtct
tccagcttgaaaatcagacaagccatctgtcatgttcaccttgaagaaatggagcaggca
gagagtgtgttaagtattctaccacaggaggctgtatctgaacatccagagctcattacc
aatttggctgatgagctaacaaacattgggaatttccactctgctctcaaatactattta
gaagtaatcagtgaacctgtgaataatggctatttgtttgtgaaaattgctcgctgttat
atgtcattggcagaacgagaacaggccattgttttctattataaagctctgaatgaactc
agtgatacggttgatattcgcataactctggcttcactcctcctggaagatggcaaacga
gatgaagctgtattagtgctttctcctccggaaaatccagatcctgatactgctaaactg
aaggcatggtggaaaaacagaaagatcaggatgaatctttgtcagatctatcattcagag
ggaatgcttgaggacttcgccaatacagcactgcagttggtacttaagtgggtttggcgg
cggacggtcaaggggaaaagaaaacgactggttctttcagagcatcaaagaaacaaaaaa
cgccgacgtcctagagatgctcaagcttcccagttgagaggcggaccaaaaaagtggcgc
aaaatcagggcaacattaaatgaaacaagaagaattagagaacgagctgctatcaaagct
cataacgaagatatctgcagtgaatctgaggaagaagttatcaaggatgaagagtatcac
cgtctctttgtggatttgtgcaaggccttggcatccctgcagagatattgggaagctctg
gagatagttaatttggctcggagattggatgctaaaatgctgcctgttgagacaaaaaag
gagcttcagtcacttggagctaaaatatcgtgcgatactatggatccaaagcagtggttt
gactgtgtaagatctgtcattcagcaacatccatatcgtttgaatgcctggaactgctat
tacagagtcatttcaagactagggaaaagagcatcgagtgaagctaagttcatgcatcac
ttaaggagcaagtaccgagattgcgtaccgcccattctaattgctggtcatcactttacc
gtgacaagccgacatcaagatgctgcaagagaataccttgaagcatataaattaatgcct
gatagtcctttaattaacctgtgtgtgggagctgcgttaatcaacttagccctcggtttt
cgactcaaaaaccgacatgagtgtcttgctcaaggctttgcatttctgtacaacaatctc
agaatttgcagtgacagtcaggaggcgttgtataacgttgctcgagcgtatcagcatgtg
ggactagtgactcttgcagcttcatactacgagaaggttttagcgatttacgagaaagaa
tacctgatgccgaaactccctaacgaggatccgaatgttgcagaagagcggaagcctgtg
aattgtgacctacgcaaagaggctgcacacaatctgcatttgatctataagcacagtgga
gcatttgatctcgcgaggcaagtcttaaaggatcactgcagtttctga
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integrated database retrieval system
