Arabidopsis lyrata (lyrate rockcress): 9326318
Help
Entry
9326318 CDS
T01578
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9326318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9326318
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
9326318
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
9326318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
RBD_DEAH11
T6SS_Tdi1_C
Motif
Other DBs
NCBI-GeneID:
9326318
NCBI-ProteinID:
XP_020869030
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MASVQQNGQRFGITEPISLGGPTELDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILD
QIVKTWIKTISRTKGLNDELLHLANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGD
FFGELQRMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDS
ILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGIN
WALLVARICQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKD
RLHIMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAFF
EAYKNYLQIDISAANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRP
LHCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPN
YVFPGGVRPSHTSKGTWDSNRRSEHRNSSTSSALAAATTTTEMSSESKAGSNSPVDGKKR
KWGDNETLTDQLRKSKHIAVSVPVENCEGGSPNPSVGSICSSPMKDYCTNGKSEPISKDP
PENVVAFSKEPAESLPIEKIATPQAPSQETEELEESFDFGNQVVEQISHKVAILTATATI
PPFEATSNGSAFPNEAVEELEVLPMRQPDAAHRPSVQQRKPIIKLSFTSLGKTNGK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgtccagcaaaatgggcaaaggtttggcattacagaacctatctctttggga
ggaccaacggagcttgatgtcatcaagactagagagctcgagaagcacttgcaagatgtt
ggattgtacgagagtaaggaggaagctgttagaagggaggaggttctggggatactagat
cagattgtaaaaacatggattaaaacaataagccgcaccaaagggttgaatgatgagctg
cttcatttggcgaatgcgaagatatttactttcggttcttatcgactaggggtacatgga
cctggtgctgatatagacactttatgtgtgggacctagacatgcaactagagaaggggat
ttctttggtgagctacaaaggatgctgtcagaaatgcctgaagtaaccgaactgcacccc
gtgcctgatgctcatgttccattgatgggattcaaacttaatggagtttcgatagatctc
ctttatgcacaacttcccctctgggttatacctgaggacttagatatatcacaggactcc
attctacagaatgctgatgagcaaactgttcgaagcctcaacggttgtagagttactgac
caaatcttgcgtctggttccaaacattcagaatttcaggacaacattaagatgcatgcga
ttttgggccaaacgacgtggagtatactctaatgtctcgggatttcttggtggtataaac
tgggcattgcttgtagctcggatatgtcaactttatcctaacgccctcccaaatatgtta
gcgtctcgtttctttagggtctacaatcaatggcgttggccgaatcccgttcttctttgt
tctatggatgaaggatccttcggtcttcaagtttgggatcctagaagaaacccaaaggac
cgattgcatataatgcccatcattactcccgcttatccttgtatgaactccagttacaat
gtctctgcaagtacattgcggattatgacaggagagtttcagagaggaaaagaaatatgt
gaggctatggaagcaaacaaagctgattgggataccctttttgagccatttgcattcttt
gaagcgtataaaaactatcttcagatagacatttccgctgcaaatgtcaatgatctaaga
aaatggaaaggctgggttgagtcacgcctccgccagctcacactgaagatcgagagacat
acttatgatatgcttcaatgccaccctcatccccatgattttcaagacgcatcccggcca
ctccattgctcttacttcatgggtctgcaacgtaaacaaggagttccagcagcagaaggc
gagcaatttgatatcagaagaaccgttgaggagtttaaacacactgtcaacgcttacaca
ttgtggattcctgggatggagattagtgtcagccatataaaacggagaagcttacctaat
tatgtgtttcctggtggagttagaccttcacatacctctaaaggaacatgggatagcaat
cgccgttcagagcacagaaattcttctacatcaagtgcactagctgctgctactaccact
actgaaatgagttctgaaagtaaagctggttctaacagtccagttgatgggaagaagaga
aaatggggagataatgaaacactcaccgatcagctaaggaagtctaaacacattgctgtt
tcagtacctgtagagaattgtgaaggcgggagtccaaatccatctgttggatcgatttgt
tcaagtcctatgaaagattattgtacaaacggtaaatctgagcctattagtaaggatcca
ccagagaatgttgttgctttcagtaaggaaccagcagagagtcttccgatagaaaagata
gccactcctcaagctcctagtcaagaaactgaggagcttgaagaaagttttgattttgga
aatcaagtggttgagcagatatctcataaagttgcaatcctgactgctactgcaactata
cctccattcgaagctacttcaaatggctctgcattccctaacgaagcagtggaagaactt
gaggttcttcccatgcgacagcccgatgcggcacatagaccttcagtacaacagcgaaaa
ccgataatcaaattgagcttcacgtctctaggcaaaaccaatggcaagtaa
DBGET
integrated database retrieval system
