Arabidopsis lyrata (lyrate rockcress): 9326405
Help
Entry
9326405 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9326405 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9326405
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
9326405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40
TFIIIC_delta
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
9326405
NCBI-ProteinID:
XP_020870085
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MDEERPPRSGEEECSISLFDYSVENHLKAVDSISDLCGEANAEIDENDINTFSSSVTFLR
EWRHYNFEPKIFAFYNEAGKSREPKDANCQNLPQFSSARAPKVKIHDDESSSSSGEISKD
FVMHVGGSVWALEWCPRVHGNPDAQAKCEFLAVATHPPDSYSHKIGIPLTGRGIIQIWCI
INATCKKDSAHFSEKSKKLTGKSRKIPSGETTETTEPKKPRGRPRKHPIETIETTEPKKP
RGRPRKKSTAELPVELDEGVLYVEALSVRYPENSVVPATPLRILRETPVTETKVNNEGSG
QVLSSENANIKLPVRRKRQKTKGTEESCKPMLLENSEAVGNVPGEPSPGISQGIALPRVV
LCLAHNGKVAWDMKWRPLYANDSLKKHRMGYLAVLLGNGSLEVWDVPMPQATSTLYLSSK
KAATDPRFVKLAPVFKCSNLKCGDTKSIPLTVEWSTSGNPDFLLAGCHDGTVALWKFSTT
KSSEDTRPLLFFSADTAPIRAVAWAPGESDQESANIVATAGHAGLKFWDLRDPFRPLWDL
HPVPRFIYSLDWLQDPKCVLLSFDDGTLRILSLVKVAYDVPATGRPYPNTKQQGLSVYNC
STFPIWSIQVSRLTGIAAYCTGDGSIFHFELTTKAVEKDTRNRTPHFLCGQLTMKDSTFI
VHSPVPDIPIVLKKPVGETGEKQRCLRSLLNESPNRYASNVSDVQPLAFGHEEDPGLESE
FEGTNNKAPKSKSKKGTKNIGEEDENSRALVCVKEDGGEGRRKEASNNNNGTKVEGFPPK
LVAMHRVRWNMNKGSERWLCYGGAAGIVRCQEIAPTSNWKPQR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaaggcctccaagaagtggtgaagaagaatgtagtatatcactgtttgat
tattctgttgagaatcatctaaaagcagtggactctatcagtgatctctgtggtgaagct
aatgctgaaattgatgagaatgatatcaacacattctcatcatcagttactttcttgagg
gaatggaggcattataatttcgaaccaaagatttttgcattctacaacgaggctgggaaa
agccgtgaaccaaaggatgcaaactgtcaaaatttgcctcagttttcttcggcacgagct
ccgaaggttaagatacatgacgatgaatcatcatcatcatctggtgaaatcagcaaggat
tttgtgatgcatgttggaggctctgtttgggcattggagtggtgtcccagggttcatggg
aatccagacgctcaggctaaatgtgagtttctagctgtggctactcatccgcctgactca
tacagtcacaagataggtattcctcttacaggtcgaggcatcattcagatatggtgcatt
ataaatgccacttgcaagaaagatagcgcccatttttcagagaagagtaaaaaattgaca
ggaaagtctcgaaaaataccatctggtgaaactactgaaacaacagaacctaagaagccg
agaggcaggcccagaaagcatccaatagagacaatagagacaacagagcctaagaaacca
agaggtagacctcgaaagaagagtactgccgagttacctgttgagcttgatgaaggtgtt
ctttacgttgaagctctgtctgttcggtatccggaaaattcagttgttcccgcaactcct
cttcggatactacgagaaactccagtaacagaaactaaggtcaacaatgaaggttcagga
caagtgttgtcttcggaaaatgcaaatatcaagcttcctgtacggagaaagagacaaaaa
actaaaggtactgaggaaagttgcaaacccatgctattagaaaatagtgaagctgttgga
aatgtaccgggcgaaccgtccccaggtatttctcaaggcatagctcttccaagggttgtc
ttatgcctggcccacaatggaaaagttgcctgggatatgaaatggcgtcccttatatgcc
aatgattctcttaagaagcatagaatggggtatttagctgtcttgctggggaatggatct
ctggaagtgtgggatgttccaatgcctcaggcaacatcaactctatatttatcttcaaag
aaagctgcgactgatccccgttttgtgaaactggctcccgtttttaaatgttcaaacttg
aagtgtggcgatacaaagagtattcctttgacagttgaatggtcgacttcagggaaccct
gatttcttactggctggttgccatgatggcacggttgctctctggaagttttctacaacg
aaatcttcagaagatacaagacctttacttttcttcagcgcagatacagctcctattagg
gcagttgcatgggctcctggtgaaagtgatcaggaaagtgcaaacatagtagctactgct
ggacatgcaggtctgaagttttgggacttacgtgatccgttccgtcctttatgggatttg
cacccagtaccaaggtttatttacagccttgattggttacaagatccaaaatgcgtttta
ttgtcctttgacgatggaacattaagaatcctaagcttggtgaaggttgcgtatgatgtt
cctgctactggaaggccttatcctaacacgaaacagcaagggttaagcgtttataactgt
tcaacttttcccatctggagtattcaagtatcaaggctaacaggaatagcagcctattgc
actggggatgggtcgattttccatttcgagcttacgaccaaagcagtggaaaaagacacg
agaaatcggactccacactttctctgtggacaattgacaatgaaagattccacctttata
gtgcatagtccagttccagacatcccgatcgtattgaagaaaccggttggtgagaccggt
gaaaaacagagatgccttcgaagtcttttgaatgaatctcctaaccgatacgcatctaat
gtttcagatgttcagcctcttgcttttggacacgaagaggatccaggtttagagtctgaa
ttcgaaggaacaaacaacaaagcaccaaagtcaaagtctaaaaagggaacgaagaacatt
ggagaagaggacgagaacagcagggcattggtttgtgttaaagaagatggcggagaagga
agaagaaaagaagctagcaacaataacaatggaacgaaagtagaagggttcccgcctaaa
ctggtggcaatgcatcgcgtgcggtggaacatgaataaaggaagtgagagatggttatgt
tacggtggagccgccgggattgttcggtgtcaagagattgctccaacctcaaattggaaa
cctcagagatga
DBGET
integrated database retrieval system
