Arabidopsis lyrata (lyrate rockcress): 9326416
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Entry
9326416 CDS
T01578
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9326416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9326416
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
9326416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
9326416
NCBI-ProteinID:
XP_002893066
UniProt:
D7KI56
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MYKSQYIGGQREKFVRLDDTDSRVSMSSNATGMKKRSCFGLFNLTSRGGGKTKNTSKSFR
EGVKIGSEGLKTIGKSLTSGVTRAVFPEDLRVSEKKIFDPQDKTLLLWNRMFVISCILAV
SVDPLFFYLPIVDNSKNCIGIDSKLAVTTTTLRTIIDVFYLTRMALQFRTAYIAPSSRVF
GRGELVIDPAKIAERYLTRYFIVDFLAVLPLPQIAVWKFLHGSKGTDVLPTKQALLHIVI
TQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSVERNDT
CLRSACKVQPDPKVCVQILYCGSKLMSSRDTDWIKSVPDLFKNNCSAKSDESKFNYGIYS
QAVSSGIVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTYPGEVLFSIAIAVAGLLLFAL
LIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEE
NIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGD
PVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRT
VKALTEVEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWAACFIQAAWRRHLR
RKIAELRRKEEEEEMDYEDDYEYDDNMGGVVTRSDSSAGSSSRLRSTVFASRFAANALKG
HKLRVSESSKSLVNLRKPSEPDFEALDTEDLG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaatctcaatatataggtggccagagagaaaaattcgtaagattagatgataca
gattcgagggtatcaatgtcatctaatgctacgggaatgaagaagcgatcatgttttgga
ttgtttaacctaactagtcgtggaggagggaagacaaagaacacatcgaaatcctttcga
gaaggcgttaaaatcggatcagagggtctaaaaacgataggaaaatcattgacatcaggt
gtgacaagagctgttttccctgaagatctaagagtatctgagaagaaaatctttgatcct
caagacaaaacacttttattatggaacagaatgtttgttatctcttgcattcttgcggtc
tctgttgatcctctgtttttctatctaccgattgtcgataactcaaagaactgcattgga
atcgactctaaattagctgtgacaactactactctaagaacgatcatcgatgttttttat
cttacgcgaatggctcttcagtttcgtacagcttatattgctccttcttctcgtgtgttt
ggaagaggtgagcttgtgatcgaccctgcaaagattgctgaacggtatttgactcgctat
ttcattgtcgatttcctcgcggttcttcccttacctcagattgcggtgtggaagtttctt
cacggatctaaaggaacagatgtattaccaacaaaacaggcgctattacacattgtcatc
acacagtacataccaagattcgttaggtttattccattaacatcggagctcaagaaaaca
gcaggagctttcgctgaaggtgcttgggctggtgctgcttattacctcctctggtatatg
cttgcaagccacattactggagcgttctggtacatgttgtcagtggaacgtaacgataca
tgcttgagatccgcttgtaaagtccagcctgatcccaaggtttgtgttcagattctgtat
tgtggcagcaaattaatgagcagtcgcgacaccgactggatcaaatcagtccctgatctt
ttcaagaacaattgttctgcgaaaagcgatgagtccaaattcaattacggaatctatagc
caggctgtgtcttctggaattgtatcttcgacaacgtttttctccaagttttgttattgt
ctttggtggggtctccaaaatctcagtacgttaggtcaagggctgcaaacaagtacctat
ccaggagaagttttgttttcaattgcaattgctgtagccggacttctcttgtttgctctt
ctcatcgggaatatgcaaacttatctgcagtcacttacggttcgtttagaggaaatgagg
attaaaagacgcgattccgaacagtggatgcatcacaggtcacttccacaaaacctgagg
gaacgagtcagacgttatgatcaatacaaatggttagaaacaagaggagtcgacgaagaa
aacatagtccagagtttaccaaaagatcttagaagagacatcaaacgccatctctgtctg
aacttagttcgcagggttcctctgtttgctaatatggatgagagactactagacgcaata
tgtgagagactaaagccaagtctatacacagagagcacttacatagtgcgagaaggagac
ccggttaacgaaatgctgttcataatccgaggccggttagagagtgtaacgacagatggt
ggaagaagtggtttctttaacagaggtttattgaaagaaggcgacttttgtggtgaagag
cttctgacttgggcacttgaccctaaagcaggctcaaacttgccttcttccacaagaaca
gtgaaggctctaactgaagtagaggctttcgctttagaagctgaagagctcaaatttgtg
gctagtcagttcaggcgtcttcacagtcgtcaagtccaacaaacgttcaggttttactct
caacaatggaggacttgggctgcttgttttatccaagccgcttggcgtagacacttaaga
aggaaaatcgcagagcttagacgtaaagaagaagaagaagaaatggattatgaagatgat
tacgagtatgatgataatatgggtggtgtggttacaaggagtgatagttctgctggatca
agttctagattacgttccacggtatttgcatcaagatttgctgctaacgcgcttaagggt
cataagctaagggtctccgagagttcaaagagtttggtgaatctaagaaagccatcagaa
cctgatttcgaggctcttgatacagaggatttgggctaa
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