Arabidopsis lyrata (lyrate rockcress): 9326491
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Entry
9326491 CDS
T01578
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X1
KO
K03243
translation initiation factor 5B
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
aly03012
]
9326491
Translation factors [BR:
aly03012
]
Eukaryotic type
Initiation factors
eIF-5
9326491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
ATP_bind_1
Roc
KOWx_SPT5
Motif
Other DBs
NCBI-GeneID:
9326491
NCBI-ProteinID:
XP_020868898
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MDPRNSSAWGGKDDLSLVSSVGGAESKNRCCVIDDDGSIGKKLCEKPKVEKTVAQPSADG
AVESFTAKKKKKKKDKGKKADASVANSSVEAKEDKLENSISEPKKKDVKVKVAEKKVPKH
VREKQEILARRKEAEERKKKEEEERLRKEEEERRIEEEREREAEEIRQRRKLRKMEKKQE
GLILTAKQKREAAKNEAFRKRVLSDAGSLLVADKNGEPSRRPIYGNKNKSACIKANDSAS
VQMKGDVETKDNHAADKPGTLHELVSVDDKKVGIIESVDTEEKYESVDVSHENGDEEDVW
DAKTNFTIRGDSDDEEEKHQPVFKKELNDTASKAHDSGPGADRQKVKPGVAGKPKTDAKK
AMPKMDGATWPKDTSKKDEGLVLNEASKEVEESLRSPICCIMGHVDSGKTKLLDCIRGTN
VQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGA
NLCDLAILVVDIMRGLEPQTLESLNLLRRRNVKFIVALNKVDRLYRWKKNKDAPLMKTMK
QQLRNVVDEFNMKLHQVKTQFQEQGLNSMLYYKNREMGETISIVPTSAISGEGVPDLLLL
LVQWAQKTMVEKLTYVDKVQCTVLEVKVIEGHGITVDVVLVNGVLRESDQIIVCGSQGPI
VTTIRSLLTPYPMNETRVKGTYMAHREVKAVQGIKIAAQGLEHAIAGTALHVIGPNEDME
EAKKNVMEDIESVMNRIDKSGEGVYVQASTLGSLEALLEFLKSSDVKIPVSGNGIGPVHK
KDIMKAGIMLEKKEEFATILAFDVKITAEARELADKMGVKIFCDDTIYRLFNKFKSYIEG
IKEEKKKETACEVVFPCVLQILPNHIYNKKDPIILGVKVNDGILKVGTPICILKRIENVR
VIMDIGRVASIKNNNRPVDNARKGQEVAIKIIASNPEEQKKCGKHFGIEDGLISHISRRS
IDVLRTYYWEELSDDEKSLVLRLERILNIQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaggaattcgagtgcgtggggtgggaaagatgatctctcccttgtctcatct
gtgggaggtgctgaatctaagaatagatgttgtgtgatagatgacgatggctctattggt
aagaagctatgtgagaaacctaaagtggagaaaactgtagctcaaccctctgcagatggg
gctgttgagtcttttacagcgaagaagaagaaaaagaagaaggacaagggcaagaaagca
gatgcttctgtagctaattcttctgtggaggcgaaggaggataaactagagaattccata
tctgagcccaagaagaaagatgtaaaggttaaagtagccgagaagaaagttcctaaacat
gttcgagagaagcaagagattcttgcgcggcggaaagaagctgaagagaggaagaagaag
gaagaagaagagagattgaggaaagaggaagaggagcgccgcatagaggaagagcgagaa
agggaagctgaagagattaggcagaggagaaagttaaggaaaatggagaagaagcaagaa
ggcctgattctaacagcaaagcaaaagcgtgaagctgctaagaatgaggctttcaggaaa
cgggtgttatctgatgctggaagtcttcttgttgcagataaaaacggtgaaccctcaaga
cgtcccatatatggcaacaaaaacaaatcagcttgcataaaagcaaacgattctgcttct
gtccagatgaaaggtgatgtagaaacaaaggacaatcatgcagcagataaaccaggtact
ttgcatgaattggtttcagttgacgataaaaaggttggaataatcgaatcagttgacaca
gaagagaaatatgaatctgttgatgtatcacatgagaatggtgatgaggaggatgtgtgg
gatgcaaaaactaattttaccatcaggggtgattctgatgatgaggaggaaaaacatcag
cctgtgtttaagaaagaattaaacgacactgcatcaaaggcacatgattcaggtcctggc
gcagatagacaaaaagtgaagcctggagttgctggcaagccaaaaacagatgccaaaaaa
gctatgcctaagatggatggtgctacctggccgaaagatacttcgaaaaaggatgaaggc
ttagtactgaatgaagcttctaaagaagtagaagaaagtcttcgctctcccatttgctgc
atcatgggtcatgttgattctggtaaaacaaagctattggattgcatcagaggaacaaat
gttcaggaaggtgaagctggaggtattactcaacagattggtgcaacatatttccctgca
gaaaacatccgtgagaggaccaaggagttaaaagctgatgctaaactcaaggtgccaggt
ctattggttatcgatacacctggacatgagtcattcacaaatctgcggtcaaggggtgca
aatttgtgtgaccttgcaattctagtggttgacataatgcgtggtctagagccacaaacc
ttagaatctctgaatcttttgagaagaaggaatgtaaagttcattgttgccttgaataag
gtggataggctatataggtggaaaaaaaacaaggatgctcctctaatgaagacaatgaag
caacaattgagaaatgtggttgatgagtttaacatgaaattacatcaagttaaaacccag
ttccaagaacaaggactcaatagtatgctttattacaagaacagagaaatgggagaaact
atcagtattgtacctactagtgctattagtggggaaggggtcccagatcttttgcttttg
ttagttcaatgggctcagaaaacaatggtggagaaactcacatatgttgacaaagtgcag
tgtaccgtccttgaggtcaaagttattgaaggccatggtattacagttgatgttgttttg
gtcaacggtgtactccgtgaaagtgatcaaatcattgtttgtgggtcacagggaccaatt
gtaacaactattagatcattattgactccttatcctatgaacgagacgcgggtgaagggt
acctatatggcacacagagaagtaaaggctgtgcagggtatcaaaattgcagcacagggc
cttgaacacgccattgctggtactgccttgcatgtgattgggcctaatgaggacatggaa
gaagccaagaaaaatgtcatggaagatattgaatcagttatgaaccgcattgacaaaagt
ggtgaaggagtttatgtacaagcgtctacattagggtctttggaagcattgctagagttc
ttgaagtcctcagatgtaaaaatacctgtcagtggtaatggcataggacctgtgcataag
aaggatatcatgaaggccgggataatgctagagaagaaagaagagtttgcaacgattttg
gcctttgatgtgaaaataactgcagaagctcgcgaacttgcagacaaaatgggagtaaaa
atcttctgcgatgataccatctatcgtctcttcaataagtttaagagttacatcgagggt
atcaaagaggagaaaaagaaagaaacagcttgtgaagtagttttcccatgtgtccttcag
attttaccaaaccatatctacaataagaaggacccaatcatccttggagttaaagtcaat
gatggaatactcaaggttggaactcccatttgcattctcaaaaggattgagaatgtaaga
gtgattatggacattgggcgcgttgcatctattaaaaataacaacaggccagttgataat
gcaaggaaaggacaggaagtggctattaaaatcattgcttctaacccagaagaacagaaa
aagtgtgggaagcactttggtatagaggacgggcttatcagtcacatttctaggcgatcc
attgacgtactcagaacttactattgggaggagttatctgacgacgagaagagtcttgtt
ctgagacttgaaaggatattgaacatacaatga
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