KEGG   Arabidopsis lyrata (lyrate rockcress): 9326504
Entry
9326504           CDS       T01578                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    9326504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9326504
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     9326504
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like LRR_NXF1-5 F-box LRR_At1g61320_AtMIF1 LRR_8
Other DBs
NCBI-GeneID: 9326504
NCBI-ProteinID: XP_020867682
LinkDB
Position
Unknown
AA seq 360 aa
MVMGGEASMELDQCFQKMKMEGISIKEWRDIPVELLMRILSLVDDRNVIVASGVCCGWRD
AFSFGLTRLRLSWCNNNMNSLVLSLAPKFVKLQTLILRQDKPQLEDNAVEAIANHCHELQ
ELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRLCRKLKVLNLCGCV
KAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMNLAYGCPDLRTLDLCGCVLITDESV
VALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLNIS
QCTALTPSAVQAVCDSFPALHTCSGRHSLVMSGCLNLTTVHCACILQAHRAHNAVPHPAH
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggtgatgggaggagaagcatccatggagctggaccagtgttttcagaagatgaagatg
gaaggaatctcgatcaaagagtggagagacatccctgtggagcttctgatgaggatcctt
tcccttgttgatgatcgtaatgtcattgttgcttctggtgtttgctgtggctggagagat
gctttctcttttggcctcactcgtctccgtctctcttggtgtaacaacaacatgaacagc
ttggttctttctcttgctcccaagtttgtaaagctgcagactttaatactgaggcaggac
aaaccgcaactagaggacaatgcagtggaggccatagcaaatcactgccatgagttacaa
gaacttgatctcagcaaaagcttgaaaattacagatcgttcactttatgcacttgctcat
ggttgccctgacctcacaaaactcaaccttagtggctgcacttcattcagtgacactgct
attgcgtatttgaccagattatgcagaaagcttaaagttttgaatctttgcggatgtgtc
aaagctgtaactgacaatgccttggaggcaattgggaataactgcaatcagatgcagtca
ctaaacttgggctggtgtgagaatatcagtgatgatggggtaatgaatttagcttatggc
tgtccagatctcaggacccttgacctctgtggctgtgttctaattacagatgagagtgtg
gtagctctagcagactggtgtgtccacttgaggtcactggggttatactattgcagaaac
ataacagacagggcgatgtactcgttagctcaaagcggggtaaagaacaaaccgggttca
tggaaatcagtaaagaaaggcaaatacgatgaagaaggactgagaagtctcaacattagc
caatgcactgccctcacaccttcagcggttcaagctgtttgtgattcctttcccgcgctt
cacacatgttcaggaaggcattcgcttgtcatgagcggttgtctgaacttaacaactgtg
cactgtgcttgtatccttcaggctcatcgtgcgcacaatgcggttcctcatccggctcat
tga

DBGET integrated database retrieval system