Arabidopsis lyrata (lyrate rockcress): 9326545
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Entry
9326545 CDS
T01578
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER
KO
K22378
E3 ubiquitin-protein ligase RNF181 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9326545
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9326545
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9326545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
RING_XB3-XBAT31
zf_RING_Vps8
zf-Nse
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
9326545
NCBI-ProteinID:
XP_020870284
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MSHNLVMEDLEEIGTEGMYIEEVLYDYATEGVYMEQVSYNYEIDHNPKPEDEGRIKVYAS
IQLPETLEFTILKFSLSAKEFSDSLGSYSWEQLNCLEDDERLNFLQVQEARMEIPRLVSN
VMLYSVKYPTDCALIYITFLFNPPEEYRRTPQVASATTSEEEEDMMQVSFDESTIDIQFR
PASKFAVESLSRRVYEKTKYSSCDDMCPICLDEFKMGERVVTLPCGHEFDDGCVLKWFAT
NHVCPLCRFELAS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcataatttggtaatggaggacttggaagaaattggtacagagggcatgtatatc
gaagaagtattatacgactatgctacagagggcgtgtatatggaacaagtatcatacaac
tatgagatcgaccacaatcctaaacctgaagacgagggaagaatcaaagtctatgcaagt
atccaattgccggaaaccttagaatttaccatactaaaattctccttgtctgccaaagaa
ttttctgatagcttgggtagttatagctgggaacaactaaattgcttagaggacgatgaa
cgtctcaattttttgcaggttcaggaagcgagaatggaaatccctagacttgtttctaac
gtcatgttatactcggtcaagtatcccacagattgtgctttaatttatattacctttctt
ttcaatccccctgaagagtatagacgcacaccccaagtggcgtctgcgacgacatctgaa
gaggaggaggatatgatgcaagtctcgtttgatgagagcaccattgatatccagtttaga
ccggcaagtaagtttgcggttgagtctttgtcaaggagagtatacgagaagaccaagtac
tccagctgcgacgacatgtgccctatatgtcttgatgagtttaaaatgggagaaagagtc
gttaccttaccctgtggacacgagtttgacgatggctgtgtcctcaagtggtttgccacc
aatcacgtttgtccattgtgccgtttcgaactagctagctag
DBGET
integrated database retrieval system