Arabidopsis lyrata (lyrate rockcress): 9326640
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Entry
9326640 CDS
T01578
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9326640
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
9326640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
9326640
NCBI-ProteinID:
XP_020866571
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MDQSQRTVAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKRVHA
PNGDLPPRNEQFILDFEQLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALRT
LCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAATAASSATSSQSLVPVSANPVSSSSN
YHSTNPTSLLPSAHGIGSPSASGNEPGSLTTFAQVKSLENGQQIARAGQTVRENAMRNSQ
RIRAAAINSLRQLSCKIILIGVEFSLKPVTHAEIFQYMLNWLVNWDRRDLGTEDSAGTSW
RSEKTLAEWLRSCLDVIWLLVKEVESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRR
RDAMAMHMLMLDQHLHCPTFGTHRIVSQVTANVSAEAVQHLRHSPITYPSVLGEPLYGED
LAMFIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQPGPIPGAVFTSDM
ICEAIIDRIVELLKLTNSDANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVSRLNGVDN
HILRTNHVTWLLAQIIRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDF
VSSCQNLRIWSLSTTTRAYLNNEQLLKGKQIDEWWRSKGERMMDYMNMDDRSIGMFWVVS
YTMAQPACETVINWLSSAGMAELPGLQPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQ
MEEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKPGVTLLVLEIL
NYRLLPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKR
EGKGPTEFTETLNRITIMTLAITIKTRGIADPDHLVYLQTMLEQILATSQHTWSEKTMRH
FPSLLRDTLNVRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQ
YLCAGACLLMQGHAENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLE
AVLDKAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQ
NRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVVYRLIENNA
MEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKLVMRMLKVLDLSKIPFSESFP
QYISPAGAAVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARPLHGKT
PGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNI
QSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFVSRSGYT
CQQLSCLLIQACGLLLAQLPPDFHTQLYLEAARVTRETWWLKDGKRAQGELDSAVGYALM
DPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAIIKNLRPVTSVAMLRVVFRIMG
PLLPRLASTHTLFNKTLTLLLTALVDVFGKNAQTTAPVEASKIADLIDFLHHIIHYEGQG
GAVQTSSKPRPDILALIGRAADSLRPDVQHLLAHLKTNPNSSIYAAAHQQNTAKTNTS
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatctcagcgaacagtcgctgcaacgccttcgtcttctcgatcataccaattc
caccctgctcgtgctgcaattatcgatcttttcaatctatacttagggagaggaagccgt
caaaagcccgatgagtccctcagagatcctccgaacaaatcacagaagcgtgttcatgct
cctaacggagacttaccaccaagaaacgagcaattcattttggattttgagcagcttcag
agccaattcaatgatccagagcaattgaggacgattactgagtcagttttgatatctttg
gtggtgcaatgtagcaatcatgcgcctcgtgctgagtttcttctctttgctttgcgtaca
ttgtgtaggattagttatatcaattgggatacttttttaccatcccttctctcttcggtt
tctgctgctgaggcttcgttaagccaaggtgttcaagccgcggcaacggctgcttcttct
gctacttcttcacagtctttagttcctgtgtctgccaatcctgtctctagctcgtcgaac
tatcattctaccaatccaacgtcattgttgccttcagctcatggtattggttctccatca
gcttcagggaatgagccgggttctttaactactttcgctcaggttaaatcgttggagaat
gggcagcagattgcaagagcaggccagactgtaagagagaatgctatgagaaatagtcaa
cggattagagctgctgctataaacagtctgcgccagctcagttgcaagattatcttgatt
ggcgttgaatttagtctcaaacccgttactcatgccgagattttccagtacatgttgaat
tggcttgttaactgggacaggagagatctgggaactgaggactctgcaggtacgtcgtgg
agatctgagaagactttagctgaatggttgcgaagttgtttggatgtgatctggctgttg
gtaaaagaggttgaatctcgaattccgttttatgagttattgcgcagtggtctacagttt
atagagaacatacctgatgatgaagccttgttcactcttatcatggagatacaccggagg
cgagatgcgatggccatgcacatgctcatgttggaccaacatcttcactgtccaacattt
ggtacccatcgtatagtgtcccaagtaactgccaatgtttcagccgaggctgtgcaacac
ttacgacattcaccaattacatatccaagtgtgcttggggaacctttgtatggagaggat
ctggcgatgtttattccaaaaggaagcctcgattgggagagagcagtgcgttgcattaga
catgctatccgcactacgccgtcaccggactggtggaagcgtgttcttgttgtggcccct
tgttatagaccatctacacaaccagggcctatccctggtgctgtattcacttctgacatg
atttgtgaggcaatcattgacaggattgttgagcttcttaagctgaccaactcagatgca
aattgttggcaagagtggctggttttctcagatatcttcttctttctaatcaaaagtggg
tgcactgattttgttgatttcattgacaagttggtttcacgccttaacggtgttgataac
catattcttcggacgaatcatgtgacgtggctgcttgcacaaataatacgcgtggagctt
gtgatgactgctttgaactcagatgctaaaaaggtggagactactaggaagatcttatca
tttcacagggaagacagaaattctgatcccaataatcctcagagtgtgttgcttgacttc
gtaagcagttgtcagaatctacggatttggtcactaagcacaacaactagggcataccta
aacaatgaacagctgttgaagggaaaacagatcgatgagtggtggagaagcaaaggagag
cggatgatggattatatgaatatggatgataggtcgattggcatgttttgggttgtttcc
tacaccatggcacaaccagcgtgtgaaacagttataaattggctatcttcagctggcatg
gctgagttaccgggattacagccaaacgaccgagtaatgatgacgcaggaagtgaccccg
ttacctatgtcattgctatctggcttttcaatgaatttgtgcttgaaattggcccttcag
atggaagaagctttgtttgttagccaggttgttcctagcattgcaatggttgagacatac
acaagattgcttctgatttcccctcattcgatgttccgttcgcatttcagtcaattggcc
cagcgaaatgcttctctactaagcaagcctggagtgactttgcttgttcttgagattctg
aactatcggttgcttccgctctacagataccaaggaaagagtaaaactttaatgtatgat
gttactaaaataatatctgcattgaaaggaaaacgtggtgaccaccgtatattcagacta
gctgaaaacttatgcatgaatctcattttatcactcagagactttttttccgtgaaacgg
gagggaaaagggccaactgaattcactgagacattaaaccgcataaccatcatgactctt
gctatcactatcaaaacacgtggtatcgcagaccctgatcacttggtttatctgcaaacc
atgttggaacagatactcgcgacgagtcagcatacatggtcagagaagacgatgcggcat
ttcccatcccttctccgtgacacattgaatgtacgggtagacaagaggggcctatcaatt
caggcatggcaacaggctgaaacaactgtgataaaccagtgcactcagcttctctcacca
tctgctgaacccgcttacgtttcaacatacctcagtcacagttttcctcaacaccgtcag
tatctatgtgctggtgcttgtctgctgatgcaaggccacgctgaaaacatcaacagcaca
aatctggcacgggttctgagagaagtttctcctgaagaagtcactgctaacatatacact
ttggtcgatgttttgcttcaccacgttcatgtagaccttcagcaaggacaatctttagag
gcagttctagacaaggcaggcgcaaatcttgcatttttcttctggacacatgaaatgctt
cctctcgacatttttcttctggcgctcattgaccgtgatgatgatccgcacgccttgata
attgcaatgagcctacttaaaacgccagaccttctgctgaggattaaaaactattgccaa
aaccgtgggtctcctgagcactggcttgtcacacaggtgttcaaacgcaatgaactccag
aaggcccttggaaaccatctttcttggaaggacaggtatccaacgttctttgatgatatt
gcagcgcgtttgcttccagttatccctctagtggtttacaggctcatcgagaacaatgcg
atggagcaagctgataatcttttgcttgcacactcgcattttctagcttatcatcctctc
agatttacgtttgtccgtgatatactcgcctatttctatggtcatcttcctgggaaactt
gttatgcgcatgctcaaagtacttgatctcagcaagattccattttctgaatcattcccg
cagtacattagccctgccggtgccgctgtatgcccacctctagattactttgcctctctt
ctgcttaatcttgtaaacaacgttatacctccacttagcagcagcagcaactgcagctcg
aggtctggctcaatggcagatatcttaaacagctcagcaagacctcttcatgggaaaact
ccaggaacatctcagcctggaccagcaaacgcctctgagggccagaaagcattctatcag
atccaagacccaggaacttacactcaactggttcttgagacggccgtgatcgagatcctc
tcgcttcccgtctccgctgcacagattgtctcttcgcttgtccagataattgtcaacata
caatcgactctgattcaatctggaaacgggttccacggcgctgcgaacggggtggggcaa
gggtcggtactgccaacgtctccctcaggagggagcacggactccatgagcgctagccgg
tccacttgtctgattcctggtatcaacacggcgagctttgtctctagaagcggttataca
tgtcagcaactgtcgtgtctgttgattcaagcttgtgggcttctgctggctcagctccct
ccggattttcacacgcagctttacttggaggcagcacgtgtgacaagggaaacatggtgg
cttaaggatgggaaaagagcacaaggtgaactagactcggctgttggatacgctttgatg
gatccaacatgggctgctcaggacaacacctcgaccgcaataggaaatatagtcgccttg
cttcatgctttcttcagcaatctcccacaagaatggcttgatggcacgaatgccatcatc
aagaacctccggcctgtgacatctgtcgcaatgctcagagttgtatttcgtattatgggg
ccactgcttccgaggcttgccagcacacatacgctctttaacaagacgctaacccttctc
ttaaccgcgctggtcgatgttttcggaaagaacgcacagacaacagcccctgttgaagca
tctaagattgctgatcttatcgatttcctacaccatattattcactacgagggacaagga
ggagctgttcaaactagcagcaagccgaggcctgacatcttggcgttaatcggaagagca
gcagattctctccgaccggatgtacaacaccttctcgctcacctcaaaaccaacccgaat
tcttcgatatatgcagctgctcatcagcagaataccgcaaagaccaacacctcttaa
DBGET
integrated database retrieval system
