Arabidopsis lyrata (lyrate rockcress): 9326767
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Entry
9326767 CDS
T01578
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9326767
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9326767
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9326767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_16
zf-ANAPC11
zf-RING_UBOX
Ctf4_C
HisKin-conflict
zf-C3H2C3
RINGv
zf_RING_Vps8
FANCL_C
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
9326767
NCBI-ProteinID:
XP_002893439
UniProt:
D7KAL6
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MGLSHFPTASEGVLPLLVMNTVVSVTLLKNMVRSVFQIVASETESSMEIEHEPEEDFVRR
RISITHFKSLYENRGEEEEEEEEEERGVECCVCLCGFKEEEEVSELVSCKHFFHRTCLDN
WFGNNHTTCPLCRSIL
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgggtctttcgcattttccgacagcgtcagaaggagtactaccacttctggtgatgaac
acggttgtttcagttactctgttgaagaacatggtgaggtctgtttttcaaattgttgca
tccgagactgaatcttccatggagatagaacacgagcctgaagaagatttcgtgaggaga
agaatctcgattacacacttcaagtctctatatgagaacagaggagaagaagaagaagaa
gaagaagaagaagagagaggtgtggagtgttgtgtgtgcctttgtgggtttaaagaggaa
gaggaagtgagtgagttggtttcttgcaagcatttcttccacaggacttgtctagacaac
tggtttggtaataaccacaccacatgtcctctttgccggtccattctctag
DBGET
integrated database retrieval system
