Arabidopsis lyrata (lyrate rockcress): 9326901
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Entry
9326901 CDS
T01578
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
9326901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9326901
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
9326901
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
9326901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
9326901
NCBI-ProteinID:
XP_020868699
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MVVNAKDSTVPTMEDLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELS
IWLENPVVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRFD
FGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSM
IRNSFRDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVL
KALTNTCDEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRKH
LGQHFQPVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLP
DNPDSLQNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKLI
NKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASF
AGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIRK
SVVEVLTGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAPS
VIPEDLEVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPSENIELIGPFEQVFMEISC
PDGGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQA
LQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKS
SVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADGLPYVGQKIYP
DEPYCRIYDEVTGKQRLMKGKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGDKF
SSRHGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHG
KFVDATPFRDAVKKTNGEKESKSSLLVDDLGSMLKEKGFNYYGTETLYSGSLGVELKCEI
FMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASY
LLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIKVNGKLPPGRTPKKVTCHSCGT
SKGMETVAMPYVFRYLAAELASMNIKMTLQLSDRGVADEEK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcaacgcgaaagactcgacggttccaacgatggaagacttgaaggagcttcac
aatctcgtcactcatcatatagagtctttcgattacatgacacagaaaggactcgatgtt
atgttcaatcgaatcaaacccgtttctgtctacgatccaaacaccgagaacgaattgagc
atttggttagaaaatcctgtagtattcgctcctcagaaagagagttttagatcaacatca
aggaaagagcctttgcttccctttgagtgtaggcaagcgaagatttcctacacaggaacg
tttatggctgatgtttgctttaagtataatgatggagtcgttgtgagagatagatttgat
tttgggcaatttcctattatgctcatgtcaaagctttgtagcttaaggggtgctgattgc
cggaaactgttaaagtgtaaagagtcaacttctgaaatgggagggtactttattttgaat
gggatcgagagagtgttccgatgtgttattgcaccaaagcggaaccatccaacaagtatg
attcggaattcattccgtgatcgtaaggaaggatacactgaaaaggcagttgtcactagg
tgtgttagggacgaccagtcatctgtcactgtaaaactgtattatcttcgcaatggaagt
gccagagttggattttggatagtgggaagggaatatttgcttcctgtcggccttgttctc
aaggctctcacgaacacctgcgatgaggaaatatacgaaagcctgaactgttgctacagt
gagcattacggaagaggcgatggagctattggaacccaacttattcgtgagagagccaaa
attattctagatgaagttcgagatttgggtctttttacccgtgaacagtgccggaagcac
ttaggacagcattttcaacctgttcttgatgggttagaaaaagaaagccatcctatggtt
gctgaagctgtgctcagggattatttatttgttcaccttgacaatgatcacgacaagttc
aatttgctcatcttcataattcagaagctatattctctggtggatcagacttctttacct
gacaatccggattctttgcaaaatcaggaaattttagtcccaggtcacgttataactatt
tacctcaaggaaaaacttgaagattggctgcggaagtgcaaaagtcttcttaaagatgag
ttgcttaacacgagctcgaaattttcctttgaaagccttgctgatgtcaagaagcttatt
aacaaaaatcctcccaggagtatcggcacgtcaattgaaacattgttgaagacaggagcg
ttgaaaacacagtctggtttggatttacagcagagagcaggttacactgttcaggctgag
agattgaactttctccgtttcctttcatttttccgggcggttcatcgaggtgcttctttt
gctgggcttcgtacaacaactgtgaggaagctgcttcctgaatcttggggttttctttgc
cctgttcacactcctgatggaacaccttgtggattacttaatcatatgacttgtactagc
cgaattacttctcagttcgattccaaaggaaacatcagagattttctgaaaataagaaag
tcagttgttgaagttcttactggggcgggtatggtatcttcattgccaaagctagtacga
gctggaccaccaaaagtcattcatgttcttttagatggtcaagttgtaggcacgctatct
tctaacctagtcacgaaggttgtctcttatttgcggagactgaaagtggaggctccttca
gtgattcctgaagacctcgaagtgggatatgtacctataagcatgggtggatcttaccct
ggattgtatttggcatcatgtcccgcaagattcattaggccggttaaaaatatatctata
ccttctgaaaatattgaactgattggaccattcgagcaggtttttatggaaataagctgt
cctgatggaggaaatggaggaaggaataactcttccccagcaactcatgaggaaattcat
ccaactgggatgataagtgtggttgctaatcttacaccttggtcagatcataaccaaagt
ccgcgtaacatgtatcagtgtcagatggcgaagcaaaccatggcatactctactcaagca
ctccaatttcgtgccgaccagaagatttaccacctgcagactcctcaatcccctgtggtc
cgtacaaaaacatacaccacttacagtattgatgagaatcctacagggactaatgcaata
gttgctgtcctcgcacatacaggatttgatatggaagacgcgatgattttgaacaaatca
tctgtggagcggggaatgtgccatggccaaatataccagacagaaaatattgatctttca
gatcagaatagccgatatgatagtggtcataaaagttttaggaggagtactactgacaaa
tcagatcattctcgtatcgacgctgatgggttaccatatgttggacagaaaatatatcca
gatgagccgtattgtcgtatctatgatgaggtaactggcaagcaaaggctcatgaaggga
aaaggtaccgaccctgtcatagttgactttgtctctgttgacatgaaaagcaagaaacat
cctcaaaaggcgaatattcgatttcggcatgctagaaaccccataatcggtgacaagttc
agcagtagacatgggcaaaagggagtttgttcgcaattgtggcctgatattgaaatgcca
tttaatggagttactggaatgcgtccagatctcatcattaacccgcatgctttcccatca
agaatgacaattgctatgcttttggaatctattgctgctaagggaggtagtttgcatgga
aagtttgtagatgcaacgccgtttcgcgatgcagtaaaaaaaacaaacggagaaaaggag
agcaagtccagtttgcttgttgatgatcttggttccatgttaaaggaaaaaggattcaac
tactatgggaccgagacattgtatagtgggtctttaggagtagagctgaagtgtgagata
tttatggggcctgtttactaccaaagactgcgtcatatggtctcagacaaattccaggtt
agatctacgggtcaagtggatcagctaactcatcagccaataaagggaaggaaacgaggt
ggagggattcgatttggtgaaatggaacgagactcactgcttgctcatggagcttcctat
ctattacacgacaggcttcatacttcttcagatcaccacattgcagatgtgtgttctcta
tgtggaagcttgctcacatcttcggttgtgaatgttcaacagaagaagctgattaaagtt
aatggaaagttacctcctggtagaactccaaagaaggtaacttgccattcttgcgggaca
agtaaaggcatggaaacagttgcaatgccctatgtattcaggtacttagctgcagagttg
gcttcaatgaatattaagatgactcttcagctaagcgatagaggagtagcggatgaagaa
aaataa
DBGET
integrated database retrieval system
