Arabidopsis lyrata (lyrate rockcress): 9326938
Help
Entry
9326938 CDS
T01578
Name
(RefSeq) 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X1
KO
K14760
o-succinylbenzoate---CoA ligase [EC:
6.2.1.26
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00130
Ubiquinone and other terpenoid-quinone biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01240
Biosynthesis of cofactors
Module
aly_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
9326938
Enzymes [BR:
aly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.26 o-succinylbenzoate---CoA ligase
9326938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-GeneID:
9326938
NCBI-ProteinID:
XP_020869912
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MILLFKTFLIFKIIPFSGMANHSRPHICQCLTQLASVKRNAVVTVYGNRKRTGREFVDGV
LSLAAGLIRFGLRNGDVVSVAALNTDLFLEWLLAVALVGGIVAPLNYRWSLKEAKMAMLL
VEPVLLVTDETCVSWCIHVQNGDIPSLKWRVLMESTSTELANDDNQFLTTEMIKQRTLVP
SLPMYAWAPDDAVVICFTSGTTGRPKGVTISHLAFITQSLAKIAIVGYGEDDVYLHTSPL
VHIGGLSSAMAMLMVGACHVLLPKFDAKTALQVMEHNRITCFITVPAMMADLIRVNRRTT
KNGAENRCVRKILNGGGSLSTQLLQEAVKIFPCAKILSAYGMTEACSSLTFMTLHDPTQE
SFKVTYSLVNQPKQGTCVGKPAPHIELMIKLDENSSRVGKILTRGPHTMLGYWGHQLVQE
NVASSESRSNEAWLDTGDIGTFDEFGNLCLIGRSNGRIKTGGENVYPEEVEAVLVEHPGI
VSAVVIGVIDARLGEMVVACVRLHENWIWSDVENRKQSFQLSSETLKHHCRTQNLTGFWN
MESDLGLELFLGCSCGDVAPADWLRFLFNNYLELYFVFLFIFKSILI
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgatactattattcaaaacatttttaattttcaaaattatacccttctccggaatggct
aatcactctcggcctcacatctgtcagtgtttgactcagctagcctccgtcaaacggaac
gccgtcgttacagtctacggaaaccggaagcgcaccggccgggagttcgtcgacggcgta
ctgagcctcgccgccggactgattcgtttcggcctccgcaacggcgatgtcgtttctgtt
gctgctcttaacactgatttgttcttggagtggttattggctgttgcattagttggagga
atagttgctcctttgaattacagatggagcttgaaagaagcaaaaatggcaatgctgcta
gtagaacctgtgcttttggttactgatgaaacatgtgtctcttggtgcattcatgttcag
aatggagatataccttccttgaaatggcgtgtgttgatggagtctacctctacagaatta
gcgaatgatgataatcagtttttgacaaccgagatgattaaacagcgtacgttggtgcct
tccttaccaatgtacgcttgggctcctgatgatgccgttgtgatatgcttcacttctggt
acaacgggaagacccaagggtgtcaccataagccacttggctttcatcacacagtctcta
gctaagattgctattgttggatatggtgaggatgatgtgtatttgcatacatcaccatta
gttcatatcggcggtctgtcatcagctatggccatgctaatggttggagcttgccatgtt
ctgctgcccaagtttgatgccaaaacagcccttcaagttatggaacataaccgtataact
tgcttcatcaccgtcccagctatgatggctgatcttattcgtgtcaacagaaggacaacg
aagaatggagctgaaaaccgctgcgtgagaaagatactaaatggaggtggatctttatca
acccaacttcttcaagaagctgtaaaaatattcccatgtgcgaaaatactttcagcatat
gggatgacagaggcatgctcttcgctgaccttcatgactctccatgatccaacacaagag
tcttttaaggtgacatattctttggttaatcaaccgaagcaaggcacatgtgttggcaag
cctgcgcctcatatcgaactgatgattaaactcgacgaaaattcatcgagggtcgggaaa
attctaactcgcggaccacacacaatgcttggatattggggtcatcaactagttcaagaa
aatgttgcatcatcagaatccagaagcaatgaagcttggcttgacacaggtgatatcggg
acctttgatgagtttgggaacttatgccttataggccggtccaatggccgaatcaaaact
ggaggcgagaatgtttaccccgaagaggtcgaagctgttctagtagagcatcctgggatt
gtttctgccgtggttataggtgtcattgatgctcgtcttggagagatggtcgttgcttgt
gttcgtttacatgagaattggatatggtctgatgttgaaaaccgcaaacaaagtttccaa
ctgtcaagtgagacactcaaacatcattgtagaacacagaacctaaccgggttttggaac
atggaaagtgatcttgggctagaactgtttttgggctgttcttgtggcgacgtggcaccc
gcggattggttgcgatttttgtttaataattatttggaattgtattttgtgtttcttttt
attttcaaatcaattttaatataa
DBGET
integrated database retrieval system
