KEGG   Arabidopsis lyrata (lyrate rockcress): 9326963
Entry
9326963           CDS       T01578                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aly01009]
    9326963
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aly03036]
    9326963
Enzymes [BR:aly01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     9326963
Protein phosphatases and associated proteins [BR:aly01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     9326963
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    9326963
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel DUF6325 DUF3759
Other DBs
NCBI-GeneID: 9326963
NCBI-ProteinID: XP_002893647
UniProt: D7KFQ0
LinkDB
Position
Unknown
AA seq 847 aa
MDNNLSVAPLESEIKEDMSLKNHPPDEDKDKDTIMEQPSSPRHRKVVARWLPDEAQRPII
DEAPVFTPSLEEFEDTLAYIEKIRPLAEPFGICRIIPPSTWKPPCRLKEKNIWEQTKFPT
RIQNVDLLQNREPMTKKPKSRKRKRRRNSRMSSSKRRSGSSPSESTSSPEAEEKFGFNSG
SDFTLDEFEKYALHFKDSYFKKKDSGGDIVKWTPSVDEIEGEYWRIVEQPTDEVEVYYGA
DLENGVLGSGFYKRAEKLTGSDMDQYTVSGWNLNNLPRLPGSVLSFEDCDISGVLVPWLY
VGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPDLFEEQPDL
LHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWL
THGQNAVELYSKETRKTSLSHDKLLLGAAYEAVKALWELSASVGKENTTNLRWKSFCGKN
GTLTNAIQARLQMEEGRIAALGRDSSILMKMEKEFDSNCERECFSCFYDLHFSASGCKCS
PEEYACLKHADDLCSCDEKDGFICLRYTMDELSSLVRALEGESNDLKIWASKVLGVEHSN
EDQTKTSSVISEEKKLKEVSVISEERKLKEGSVISEEKKLKEGSFDLNIDLELDYQEDLK
EEVSTSGGELTASENLGVSVEPINLGFLIFGKLWCNKHAIFPKGFRSRVKFYNVLDPTRM
SNYISEVLDAGLMGPLFRVTLEESPDESFFNVSAQQCWEMVLQRVKDTSTSLGLPTLSQF
EGINGLQMFGFLSPSIVQAIEVLDPNHRLVEYWNHKDQTSSDSKDHFISSNCSASLTKGK
LFGVDLM
NT seq 2544 nt   +upstreamnt  +downstreamnt
atggataataatctcagcgttgctccattagaatctgagatcaaagaggatatgtctttg
aagaatcatcctccagacgaggataaggacaaggacactattatggaacaacctagtagt
ccacgtcatcggaaggttgttgctagatggttaccggatgaagcgcagaggccgattatc
gatgaagctccggtattcaccccatcgttagaggagtttgaagatacacttgcttatatc
gaaaagatacgtccactagcagagccgtttggtatctgtcgaatcatcccaccatcgaca
tggaaacctccttgccggcttaaggagaagaatatatgggagcaaacaaagtttcccacc
cggattcagaacgtcgacctgcttcagaaccgtgagccgatgacaaagaaaccaaagagt
agaaaacgtaaaaggagaagaaactcgagaatgagttcgtctaagagacgatctggttct
tctccctctgaatcgacttcatctcccgaggctgaggagaaatttggtttcaattctggt
tcagacttcactcttgatgagtttgagaaatatgctctgcattttaaagactcttacttc
aaaaagaaagactctggtggagatatagtaaaatggacaccgtctgtggatgaaatagaa
ggcgaatactggcggatagttgagcaaccaacagatgaagtggaggtatactatggagct
gacttggagaatggggtacttggaagcgggttttataaaagagcggaaaagttaaccggt
agcgatatggatcagtacacagtatctggctggaacttgaataacctgccgcgtctcccc
ggctctgtactctcttttgaagattgtgatatctctggagttctagttccttggctctat
gtaggaatgtgcttttcatcattttgttggcatgtggaggaccatcatttatattcactg
aactatcatcactttggggagccaaaagtatggtatggtgttccaggaagcaatgcaacc
gctctcgagaaggcgatgagaaaacatctacctgacctgtttgaagaacagcctgattta
cttcatggcctggttactcagttttctccttcaatcctgaaagatgagggagtccaggct
taccgggtggttcagaattcaggggagtatgtattgacattcccgagggcgtatcatgca
ggattcaactgcggtttcaactgcgcagaagcggttaatgtggctcctgttgattggttg
actcatggacagaacgctgtggaactttacagtaaagagacaaggaagacttctctgtct
catgacaaacttcttcttggagcagcgtatgaagcggttaaggccctttgggaactctca
gcttctgtgggaaaggaaaatacaacaaatttgagatggaaaagtttctgtgggaagaac
gggacacttaccaacgcgatacaggctcggttacaaatggaagagggaagaattgcagca
cttggtagggattcttcgatcctaatgaagatggagaaggagtttgattcaaactgtgaa
agggaatgcttctcatgcttttatgatttgcatttctcggcttctggctgcaagtgctct
cccgaagaatacgcttgccttaagcatgcagatgatctttgttcatgtgatgagaaagat
ggatttatttgtctccggtacacaatggatgagttaagctcgttggtcagagcattggaa
ggcgaatcaaatgatttaaagatatgggcttccaaggtgttaggcgttgaacacagtaat
gaagatcagactaagactagttcagttatcagtgaggagaagaagttaaaagaagtttca
gttatcagtgaggagaggaagttaaaagaaggttcagttatcagtgaggagaagaagtta
aaggaaggttcttttgatctgaacattgacttagagttggattatcaagaagaccttaaa
gaagaagtcagcactagtggcggcgagttaaccgcctcagagaatcttggtgtatcggtt
gagcctataaacctcgggttcttgatttttggaaagctttggtgcaataagcatgctata
ttcccaaaaggattcaggagtcgtgtcaagttctacaatgtgcttgatccaacaagaatg
agcaattacatctccgaggttttggatgcaggactcatgggtccattgttcagggtcact
ctggaagaatctccagacgagagcttcttcaatgtctcagcccaacaatgctgggaaatg
gtgttgcagagagttaaagatacatccaccagtcttggtcttcctacattatcgcagttt
gagggtatcaacggccttcaaatgtttggtttcctctcaccctctatagttcaggccatt
gaagttcttgacccaaaccatcgactcgttgagtactggaaccacaaggaccaaacttca
tcagactcaaaagatcacttcatatcatcaaactgttccgcaagtttaaccaaaggaaaa
cttttcggagtagatttgatgtaa

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