Arabidopsis lyrata (lyrate rockcress): 9327070
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Entry
9327070 CDS
T01578
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
9327070
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aly01001
]
9327070
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9327070
03036 Chromosome and associated proteins [BR:
aly03036
]
9327070
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
9327070
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
9327070
Protein kinases [BR:
aly01001
]
Serine/threonine kinases: Other
TAF1 family
9327070
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
9327070
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
9327070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
zf-CCHC_6
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
9327070
NCBI-ProteinID:
XP_020870567
LinkDB
All DBs
Position
Unknown
AA seq
1910 aa
AA seq
DB search
MAESNGKGSHNETSSDDDEEYEDNSRGFNLGFIFGNVDNSGDLDADYLDEDAKEHLSALA
DKLGSSLPDINLLAKSERTASDPAEQDYDRKAEDAVDYEDIDEEYDGPEVQVVSEEDHLL
PKKEYFSTAVALGSLKSRASVFDDEDYDEEEEQEEEHAPVEKSFETEKREPVVLKEDKAL
EYEEEAKEDHMDTEDVQEEEVDELLDGTLDDKGATPLPTLYVEDGMVILQFSEIFAIHEP
PQKRDRRENRYVTCRDKYISMDISELVEDDEEILLKSHGRIDTLVKQADLIQLDVPFPIR
EGLQLVKASTVGGIAPESREFTKLVRDSCIMGELLKEDLIDDNSSLCQSQLSMEVFPLDQ
HEWEHRILWEHSPEISGNSGEVFERGLEPEAMLVEGTNAETEEENLNAMNSREKVQADDN
MPVPFSANLLESFGSRGSQSTNKSRHHPQLLRLESQWDENHLSENDESGVKKIKRLENDA
LGRFSRLVLRERDLGNEAWLDSIIWDSDKELSRSKLIFDLQDDQMVFEILDNEESKNLQL
HAGAMIVSRSSKSKDETFQEGCESNSGWQFNISNDRFYMNGKSSQQLQANTNQSGVHSLR
VFHSAPAIKLQTMKSKLSNKDIANFHRPKALWYPHDNELAIKQQGKLPTRGSMKIIVKSL
GGKGSKLHVGIEESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAAQNVQPNSLV
HLIRTKVHMWPWAQKLPGENKSLRPPGAFKKKSDLSTKDGHVFLMEYCEERPLMLSNAGM
GANLCTYYQKTSPEDQRGNLLRNQSDTLGNVMILEPGDKSPFLGEIHAGCSQSSVETNMY
KAPIFPQRLQSTDYLLVRSPKGKLSLRRIDKIVVVGQQEPRMEVMSPGSKNLQTYLVNRM
LVYVYREFLKRGGGGHPIPADELSFLFSNLTDAIIKRNMKVCANLKRDKNGQSYWAKKPG
LKDPAENELKKLVAPEHVCSYESMLAGLYRLKHLGITRFTLPASISTALAQLPDEAIALA
AASHIERELQITPWNLSSNFVACTNQDRANIERLEITGVGDPSGRGLGFSYVRAAPKAPA
AAGHMKKKAAAGRGAPTVTGTDADLRRLSMEAAREVLIKFNVPDEIIAKQTRWHRIAMIR
KLSSEQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKCQEIWDRQLLSLSAFDGDENE
SENEANSDLDSFAGDLENLLDAEEGGEGEESNMSKNDKLDGVKGLKMRRRPSQVETDEEI
EDEATEYAELCRLLMQDEDQKKKKKKMKGVGEGMASFPPRPNIAFQTGEPVRKANAMDKK
PIAIQPDASFLINESTIKDNRNVDTIIKTPKGKQVKESSNTLGQLKKVKILNENLKVFKE
KKSARENFVCGACGQHGHMRTNKHCPRYRENTESQPEGIDVDKSAGKPSSSEPSGLPKLK
PIKNSKAAPKSAMKTSVDEALKGDNSTSKTGGLPLKFRYGIPVGDLSDKPVSEAPGSSEQ
AVVSDIDIGTKSTSRISKLKISSKAKPKESKVESEIPSHSLMPTFSRERGESESHKPSVS
GQPLSSTERNPAASSRHTISIPRPSLSMDTDQAESRRPHLVIRPPTEREQPQKKLVIKRS
KEINDHDMSSLEESPRFESRKTKRMAELAGFQRQQSFRLSENPLERRPKEDRVWWEEEEI
STGRHREVRVRRDYDDMTISEEPNEIAEIRRYEEVIRSEREEEERQKAKKKKKKKKLQPE
LVEGYLEDYPPRKNDRRLSERGRNVRSRYVSDFERDGAEYAPQPKRRKKGEVGLANILER
IVDTLRLKEEVSRLFLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEYRNREQFRHDVW
QIKYNAHLYNDGRNPGIPPLADQLLEICDYLLDDYEEQLKEAEKGIDPND
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatccaacggcaagggttcccacaatgagacttcctcagacgacgatgaggaa
tatgaggacaacagcaggggttttaaccttggattcatctttggaaatgttgataactct
ggcgacttggatgctgattaccttgatgaggacgccaaagaacatctttctgcattggca
gataagctgggttcatctctaccagatataaatttattggcaaaatcagaacgtacagca
agtgatccagctgagcaagattatgatagaaaagctgaggatgctgttgattatgaggat
attgatgaagagtatgatgggcccgaagttcaagtagttagtgaggaagatcatctacta
ccaaaaaaggaatatttttcgactgcagttgctttgggtagtttaaagtcaagagcttct
gtgtttgatgatgaagattatgatgaggaagaagaacaagaggaggagcatgcgccagtt
gaaaaatcttttgaaactgaaaagagggaaccagttgtcttaaaggaagataaggccttg
gagtatgaagaggaggctaaagaggatcatatggacaccgaagatgtccaggaggaggag
gtggatgagttattggatggtacattggatgacaaaggcgctaccccactgcctacgttg
tatgtcgaagatggtatggtcatcttacagttctccgagatatttgcgatccatgagcct
ccacagaaacgggacaggagagaaaatagatatgtcacttgtagagacaaatacatatct
atggatatttctgagcttgttgaagacgatgaggagatactcctgaagagccatggtagg
attgatactcttgtgaaacaagctgatctaattcagctggatgttccctttccaattaga
gagggtttacagctggtaaaagctagcacagtgggtggtatcgcaccagaatcaagagaa
tttacaaagctagtaagggattcatgtatcatgggtgaactgttgaaggaagacttaata
gatgataattcatctctgtgccaatctcaattatcaatggaagtttttcctcttgaccag
catgaatgggaacatcggattctttgggaacattctcctgaaatcagtggtaattctggt
gaggtctttgaacgtggacttgagccggaagctatgctggttgaaggaacaaatgcagag
actgaagaagaaaacttgaatgcgatgaactctagagagaaagttcaagctgacgataat
atgcctgtgcctttttctgccaatctgttggagtcttttggctcaagaggttcccagtct
actaacaaaagtagacatcatccacaactgctaaggttagaatcccagtgggatgagaat
catcttagtgaaaatgatgaatctggagtgaagaagataaagcgacttgaaaacgacgcc
cttgggcgctttagcagacttgtattgcgagagagggatttggggaatgaggcatggtta
gatagtataatatgggactcagataaagagttgagcagatctaaactaatttttgatctt
caagatgatcaaatggtctttgaaattttggataatgaggaaagcaaaaatcttcaactt
catgctggagctatgattgtatcccggtcttcaaaatccaaggatgaaacctttcaagaa
ggctgtgaatcaaattctgggtggcaattcaatatttccaatgacaggttttatatgaat
gggaaaagctctcagcaactgcaagcaaatactaatcaatccggtgttcatagtttgaga
gtttttcattcagcaccagcgattaaattgcagacgatgaagagtaaattgagcaataaa
gacatagcaaattttcaccggcccaaagctttgtggtatccacatgacaatgagctagcc
atcaaacagcaaggaaagttacccacccgaggatccatgaaaattatagttaagagcctg
gggggtaaaggaagcaagctacacgttggcatagaggaatctgtctcttctttaaaagcc
aaggcttctagaaagctagattttaaggaaacagaagcagtgaagatgttctatatggga
aaggaacttgaggatgaaaagtctcttgctgcacaaaatgttcaaccaaattccttggtt
catcttatacgtactaaagtacatatgtggccatgggcgcagaagctacctggcgaaaat
aaatctttgagacctcctggggcattcaagaagaaatctgacttatcgactaaagatggc
catgttttcttgatggagtactgtgaggagaggccgctgatgctcagcaatgcaggaatg
ggtgcaaatttgtgcacatattatcagaagacatccccagaggatcaacgtggcaacttg
ctgcgcaatcaaagtgacaccttagggaatgtgatgattctagaacctggggacaagtct
cctttccttggggagatacacgctggttgcagtcagtcatctgttgaaacaaacatgtat
aaagcacctatttttccgcagagattgcagtcaacagattacttgttggtccggtctcct
aaaggaaaactctctctaaggcgtattgacaagatagttgttgtcggacaacaggaacct
cgcatggaagtaatgtctcctggatcaaagaatctacagacttatttagtgaacagaatg
ttggtttatgtgtaccgagaatttttgaagcgtggtggggggggccacccaatacctgca
gatgagctgtctttcttattttctaacttgacagatgcaatcatcaagaggaatatgaaa
gtttgtgctaatttgaagagggataaaaatggccagtcttattgggccaaaaaacctggt
ttaaaagatccagctgagaatgagctgaaaaagcttgtagcaccagagcatgtatgttct
tatgagagtatgttagctgggctgtatcggctcaaacatttagggatcacccggtttaca
ttgccagccagcatatcaactgcattggctcagctcccagacgaagctattgctcttgct
gctgcatcacatattgagcgggagttgcagattactccatggaatctgagcagtaatttt
gttgcttgtacaaatcaggacagagcaaatatagagcggttggaaattactggggttggt
gatccctctggacggggtctagggttcagctacgtcagagctgcgccaaaagcaccagct
gcagccgggcatatgaagaaaaaggcagcagccggccgtggagccccaactgtcactggt
acagatgctgatcttcgcagattaagcatggaagcagctcgagaggttcttatcaagttt
aatgtccctgatgagataattgccaagcaaactcgatggcaccgtatagctatgatacgg
aagctatcaagtgagcaggctgcatccggtgttaaggttgaccctacaaccataggcaag
tatgctcgtggccagagaatgtctttcctgcagatgcaacagcaggcccgagaaaagtgt
caggagatttgggatagacagcttttgtccctttcagcttttgatggtgatgagaatgaa
agcgaaaatgaggcgaatagtgacttggactcctttgccggagatctggaaaatctacta
gatgctgaggaaggtggggagggggaagaatctaatatgtctaagaatgacaagttggat
ggagtaaagggtctcaagatgagacggcggccatctcaagttgagacagacgaagagatt
gaagatgaagctactgaatatgcagagttatgcagactgctgatgcaagatgaggatcag
aagaagaaaaagaagaagatgaaaggtgtgggagagggaatggcatcctttcctccacga
cccaatatagcttttcagacaggtgaacctgtaagaaaggccaatgccatggacaagaaa
cctattgccatccaacctgatgcatcgttcttaataaatgagagcaccatcaaagacaat
agaaatgttgatactattataaagacccccaaaggtaaacaggtaaaagagagcagcaat
actttgggccagctgaagaaggtcaaaatactgaatgaaaacctaaaggtattcaaggaa
aagaaatcggcgagagagaactttgtttgcggagcctgtggtcagcatggacacatgaga
accaataaacactgcccaagatacagagaaaatacagaatcacaacccgaaggcatagat
gtggataagtctgccggaaaaccgagctcttcagaaccatcaggtctgcccaagctgaaa
cctattaagaacagcaaggctgcgccaaaaagtgcaatgaaaacttctgtagatgaagct
ctgaagggagataattcaacttccaaaactgggggtctccctctgaagtttagatatggt
atccccgttggagatttgtcagataaacctgtttctgaagctccaggaagttctgagcaa
gcggtggtgtctgacatagacattgggactaagtccacatctaggatcagcaaactgaag
atttcaagtaaggcaaaacctaaagaatcaaaggttgaatctgaaataccttcgcattca
ttgatgcctacatttagcagagagagaggggagagcgaatcacacaagccttctgtctct
ggacaacccttgtctagtacagagagaaatccggcagcctcaagcaggcacactatttct
atcccgcggccatcattaagcatggacacagatcaagctgaatcgcgtaggcctcatctt
gtgatacgaccgccgacagaaagagaacagcctcagaagaaacttgttataaaacgttcg
aaagagataaatgatcatgacatgagtagtcttgaagagagtccccggtttgagtcccgg
aaaacaaaaagaatggcagaactagcgggttttcagaggcagcaaagcttcagattgtca
gagaaccctcttgagcggagaccaaaagaggatagagtatggtgggaagaagaggaaata
agtacgggaagacatagggaagttagggtgagaagagattatgatgatatgactatatca
gaagaacccaatgagatagctgagatcagaagatacgaagaggtaatacggagtgagagg
gaggaagaggaacgacaaaaagccaagaagaaaaagaagaaaaagaaactgcaacccgaa
ttagtagaagggtatctagaagactatcctcctcgaaaaaacgatagaagattgtcagaa
agaggtcggaacgtcagaagccgctatgtctccgactttgaaagagatggtgcagagtat
gcgcctcaaccaaaacgacgcaagaaaggagaggttggcctagcaaacatcttggaacgc
atagtggacacactaagactaaaagaagaagtgtcacgtctcttcttgaaaccagtatcc
aagaaggaggctccagattatcttgatatcgtggaaaacccgatggatctctcgacaatc
cgggataaggtacggaagatagagtacagaaaccgagagcagtttagacacgatgtctgg
cagataaagtacaatgctcatctttacaacgatggacgtaacccaggaataccacctttg
gcagatcagttgctggagatttgtgattacttgttggatgattatgaagagcagttaaaa
gaagcagagaaaggtatagatcccaatgactga
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integrated database retrieval system
