Arabidopsis lyrata (lyrate rockcress): 9327294
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Entry
9327294 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9327294
04121 Ubiquitin system [BR:
aly04121
]
9327294
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9327294
Membrane trafficking [BR:
aly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
9327294
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9327294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
zf-RING_16
DmmA-like_C
DUF5817
Motif
Other DBs
NCBI-GeneID:
9327294
NCBI-ProteinID:
XP_002891232
UniProt:
D7KMS9
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MSLSRPITRTDGASNGAFRTFGLYWCYHCNRMVRIASSNPSEIACPRCLRQFVVEIETRR
PRFTLNHAAPPFDASPEARLLEALSLMFEPAIIGGFGADPFLRARSRNILEPESRPRPQH
RRRHSLDNVNNGGLPLPRRTYVIFRPNNRTRELGNIIPPPNQAPPWHVNSNDFFTGASGL
EQLIEQLTQDDRPGPLPASEPTIEALPSVKITPQHLTNDLTQCTVCMEEFIVGGDATELP
CKHIYHKDCIIPWLRLHNSCPICRSDLPPVNTVADSRERSNPTRQDIPERRRPRWIQLGN
IWPFRARYQRVSPEETTNQNPRSTRS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgagtcggcccataacacggaccgatggtgcatccaatggagcatttaggact
tttggtctctactggtgctaccattgtaatcgtatggtcagaattgcatcctctaaccca
tctgagatcgcgtgccctcgatgcttgagacaatttgtcgtcgagattgaaacaagacgg
cctcggtttactctcaatcatgctgctccgccttttgatgcttctcctgaggctcgtctt
ctcgaagctctatcgctcatgtttgagcctgcaatcataggtggatttggtgcagaccca
tttcttagggcaagatccagaaacatcttggaacctgaatcaagaccccgaccacaacat
cgacgacgccacagccttgacaatgttaacaatggtggtttgcctctaccaagaagaaca
tatgtaattttccgacccaataatcggactagagaactcggaaacataattccgccacca
aatcaagcaccaccctggcatgtgaactcaaacgatttctttaccggagcatcaggctta
gagcagctgattgaacaactaacacaagacgataggcctggaccactgcctgcatcagaa
cccaccattgaagcgctaccatctgtgaagataacaccacaacatctaaccaacgacttg
acccaatgcacagtgtgcatggaagaattcattgttggtggggatgcaacggaactacca
tgtaaacatatttaccataaagattgtataatcccgtggctcaggcttcacaattcttgc
cctatctgtcgcagtgacctgccacctgtcaacaccgttgctgattctcgagaaaggagc
aatcctactagacaagacatacctgaaagaaggcgtccaaggtggatacagcttgggaac
atttggccctttagagcacgataccaaagagttagtccagaagaaacaacaaaccagaat
cctcgaagtactaggagctag
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