Arabidopsis lyrata (lyrate rockcress): 9327317
Help
Entry
9327317 CDS
T01578
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9327317
Spliceosome [BR:
aly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
9327317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
RL
Nup35_RRM_2
TGF_beta
DUF3587
UNC45-central
DUF1797
Motif
Other DBs
NCBI-GeneID:
9327317
NCBI-ProteinID:
XP_002893943
UniProt:
D7KMW6
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAISALQF
FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV
FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL
QVNYNNDRSRDYTNPNLPAEQKGRSSHPGYGDVGVAYPQMANTSAIAAAFGGGLPPGITG
TNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVH
FLKGAVLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHLS
TLPQDVTEEEVMNHVQEHGAIVNTKVFEMNGKKQALVQFENEEEAAEALVCKHATSLGGS
IIRISFSQLQTI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcttccaaagtcattcatgttcgtaatgttggtcatgagatttctgaaaat
gatttgcttcagcttttccaaccatttggggttataactaagcttgtgatgctcagggca
aagaatcaggctcttcttcaaatgcaagatgtttcttctgcaatcagtgctcttcagttt
tttactaatgttcagccaaccataagaggtaggaatgtgtatgtccaattctcgtctcac
caagaattgacaacgatagagcagaatattcatggacgggaagatgagccgaatcgtatt
ctcttagtcacaatccatcacatgctgtatccaattactgttgacgtgctgcatcaagtt
ttttctccctatggatttgtcgagaagcttgtcactttccagaagtctgctggttttcaa
gctcttatacagtatcaggtacaacagtgtgctgcctctgctagaactgctctacagggt
cgtaacatatatgatgggtgttgtcagttggatatccagttctcaaaccttgaggagctg
caagtaaattacaacaatgatcgatctagagattatacaaacccaaacctgcctgcggag
caaaaaggccgttcatcgcatcctggctatggtgatgtaggagtggcatatcctcagatg
gcaaacacatctgcgattgcagcggcctttggaggaggcttgcctccgggtataaccggc
acaaatgataggtgtacagtccttgtctccaacctgaatgcagatagtattgatgaggat
aagctattcaatctattttctctttacgggaacattgtaaggattaagcttcttcggaac
aaacctgaccatgcccttgtccaaatgggcgatggtttccaagccgaacttgcagtacat
ttcctcaagggagcggtgctgtttggtaagcggctagaagtaaacttctcaaagcatcca
aatataacaccaggcacagactctcatgattacgtaaactctaacctgaaccgcttcaac
cgcaatgctgcaaagaactaccgctattgctgctcccctacaaagatgattcacctatcg
acacttcctcaagacgtgacagaggaggaagtgatgaaccatgtccaagaacacggtgca
atagtgaacacaaaagtgtttgagatgaacgggaaaaagcaagctctggtgcagtttgag
aacgaggaggaagctgcggaagcgttggtgtgcaagcacgcgacttctctaggcggatca
attatcagaatctccttctcccagctacagacgatttaa
DBGET
integrated database retrieval system
