Arabidopsis lyrata (lyrate rockcress): 9327489
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Entry
9327489 CDS
T01578
Name
(RefSeq) fanconi-associated nuclease 1 homolog
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
9327489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9327489
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
9327489
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
9327489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_HTH
FAN1_TPR
Motif
Other DBs
NCBI-GeneID:
9327489
NCBI-ProteinID:
XP_020868368
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MLTGRESLLRLIGKRRRYLPNRQLLLSAHTPNSLNLEVNDDGNLISLAGDDGILSDNPTP
LDDPSKFSDDLSLSTRKKRRLTQTTLLQSNFWSVPKQLEDGSETSQFNLVQRSDSICCKV
EDGSCSPNSEEVLKTVTLDEANGEAIETFIVGRKFSDVQDLEIGGNIFLLRHPENVKDRN
AIKVVSADSEMLGYLTKDISQCLSPLIDDYGLTFEGTITSVPKNSSEAVPIKVVCHKMTS
DGWKECEFYGDFKPLWEKVLQVVEHQMQFPPKTTRYQLNFNVLLQEVLRSCSHLFTAEER
AFLESFPTLSEDSQRLFIRLYTRKGPWFRLSNISYPEVSDSLQALKDLTVRRFMSSVKDA
SELDHQKMKEITELLNVTELRDILSINKVFSCGSRKRDLINSLCSCHNDGTRINLATIIL
ERTGLCAKISSTAESLIWRVERLFFLNGEQDLSSFVLQDLGIIKYPTYKCIDSEQIFSNR
TKLLAYEEAIEVAQLMDESLDNEHSRTVLKCIMIAETRISSSSLDSAHAAAFNRFTASWV
YSKVVLLGISFFENHKRYNQAVYLLRRLLSCFNCDGRRGYWTVRLSMDLEHIGRPNESLT
VAEQGLLDPWVRAGSRVALQRRILRLAKPPRRWKTPTFSNLVENKIPEVTIQGRSLNCEV
GMKNRFYGEDGEQCGVEQLALQYYSGEGGWQGIHTESSIWLTIFGLLMWDILFSDVPGVF
QTRFQTAPLDLETESFYLTRKETIESQLEKVANGMAEEILIISYETHRGTACRGVAWDRF
LLEELRAAVACVGGMCIASLCRHLAQDYRSWCSGMPDLLLWRFKENGYEGEAKLVEVKSE
RDRLSEQQRAWLLLLMDSGFNVEICKVRPASLTKT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccggacgggagagcttgctccggttgattggaaaacgccggcgatatctcccc
aatcgccaacttcttctctccgctcatactccgaattcgttgaatctcgaggtcaacgac
gatggcaatcttatctcattagccggagatgatggtattctgtcggataatccgactcct
ctcgatgacccgagcaaattctctgatgatttgagtctatccacaaggaagaaacggaga
ttaactcagaccactcttcttcagtcaaatttctggtcagtgccaaaacaattagaagat
ggttctgaaacttctcaattcaatttggtgcaaagaagtgactccatttgctgcaaggtt
gaagatggttcatgttctccaaatagtgaggaggttttgaaaactgtgactttagatgaa
gccaatggtgaggctattgaaacctttatagttggtaggaagttcagtgatgttcaggat
ttagaaattgggggtaacattttccttttgagacatcctgagaatgtcaaggatcgcaac
gctataaaggttgtgtctgcagactctgaaatgcttgggtatttaactaaagatatttcc
cagtgcttgtccccgctgatcgatgactatggccttacgtttgagggaacaataacatct
gttccaaagaattcttctgaagctgttccgatcaaagttgtttgtcacaagatgacatct
gatggttggaaggaatgtgaattttatggagattttaaacctctttgggagaaagttctt
caggttgttgagcatcagatgcaatttccgcctaaaacaacaagataccagttgaatttc
aacgtattactacaagaggttctaagaagctgctctcacctatttacagccgaggaaagg
gcattcttggaatctttccccactctttcagaggatagccagagacttttcatccggctt
tacacacgaaaaggaccttggtttaggctatcaaatatttcataccctgaggtgtctgat
tctcttcaagccctgaaggatctaacagtcaggagatttatgagttcagtgaaggacgca
agtgaactagatcaccaaaagatgaaggagatcacagagttgcttaacgtcactgaactc
cgtgatatcttatctattaacaaggtgttcagttgcggctcaagaaagagagaccttatt
aattcactttgttcttgtcacaacgatggaacgagaataaatctagcaacaataattcta
gaaagaacaggactatgtgctaagatatccagtactgcagaatctctcatatggcgcgtt
gagaggcttttctttctcaatggggagcaagatctatcgtcttttgttctgcaggatctt
ggtattattaaatacccaacttacaaatgcattgactcagagcaaatattttcgaatcgg
actaagcttttagcatatgaagaggccattgaagtggctcagttgatggatgagtctctt
gacaatgagcattctcggacagtgttgaaatgcatcatgattgctgaaacccgcatatcc
agttcttctttggattctgctcacgctgctgcatttaatcgctttacagcttcatgggtt
tactcaaaggtggttctcttaggaatttccttttttgagaaccacaaaaggtacaaccaa
gcagtttatctactgaggcgattgctcagctgttttaattgtgatgggagacgaggatac
tggacagtcaggttatcaatggatttggagcacataggacgtccaaatgagagccttaca
gtagcagagcagggactattggatccttgggtgcgtgctggttcaagggtagctttgcaa
aggcgcattcttcgtttggcaaaacctccaagacgctggaaaactcccactttttcaaat
ctcgtcgaaaacaagatccccgaggttactattcaagggagatcactgaattgtgaagtt
ggcatgaaaaacaggttttatggagaagacggagaacaatgtggagtcgagcagcttgca
ttgcagtattacagtggagaaggaggatggcaaggaattcacacagagagtagcatctgg
ttaacgattttcgggcttctcatgtgggacattctattttccgatgtcccgggtgttttc
caaacccgattccagactgctccattggacttagagactgaatccttctacctaaccagg
aaagaaacaatagagtctcagctcgaaaaagttgcaaacggaatggctgaagaaatacta
atcatatcatatgaaacacaccgtggaacagcgtgcagaggagtggcttgggatcgattt
ttgttagaggaattgagagcagcagtggcttgtgttggaggtatgtgtatagcatcgctg
tgccggcatttagctcaagactataggagctggtgcagtggaatgcctgatctactgcta
tggcggttcaaggagaatggttatgaaggtgaagctaagcttgtggaagtgaaatcagag
agagataggttatcagaacaacaaagagcttggcttctacttctaatggattcaggcttt
aatgttgagatttgcaaagtaagacctgcttctttaactaaaacttaa
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integrated database retrieval system
