Arabidopsis lyrata (lyrate rockcress): 9327578
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Entry
9327578 CDS
T01578
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 6, mitochondrial
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00900
Terpenoid backbone biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Module
aly_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
9327578
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aly01006
]
9327578
Enzymes [BR:
aly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
9327578
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
9327578
2.5.1.29 geranylgeranyl diphosphate synthase
9327578
Prenyltransferases [BR:
aly01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
9327578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
9327578
NCBI-ProteinID:
XP_002891516
UniProt:
D7KEY2
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MIRHSKGPILIIIMRHRYTLVLSAMRLIRPSNRRHLTSIASPDSEFISYMNNKAKSINKA
LDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPMLCLVACELVGGQESTAMPAAC
AVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTAILAANALMSLAVEQTLASTSL
GVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFETEDEGLRYLEFIHIHKTAVLV
EAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGK
LTYPKVMGVENAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcattcgaaggggccaattttgattatcatcatgaggcatcgttacactctg
gttctgtctgcaatgcggctgatacgaccgtccaaccgccgccatctaacttcgatcgca
agccccgactctgagttcatttcatatatgaacaataaggctaagtccatcaataaagca
ctagacgattccattcctctttgcaacaattccgttcctctttggaagccagtactcgag
gttcgcgaagctatgaggtacacgcttctctcaggcgggaaacgagtaaggccaatgctt
tgtttggtcgcttgcgagctcgtaggtggccaagagtcaacagcaatgcctgcagcctgt
gcagttgagatgattcacgcttcgtcgcttatcctagacgaccttccttgtatggatgat
gacagcctccgccgtggaaaacccaccaaccataaagtctttggcgagaaaacagccatc
ttggccgctaatgcccttatgtctttggcggtcgagcagacgttggcatcaacctcattg
ggggtgacttcagaaagggttcttcgggctgttcaggagatggcgagagctgttgggata
gagggacttgtggcaggccaagcagcagatttggccggaggaaggatgagttttgagaca
gaagacgagggattgagatatcttgagttcattcatattcataaaaccgcggttttggtt
gaagctgcggctgttgtgggagctataatgggaggtgggtccgatgaagagattgagagg
cttaagagctacgcgaggtgcgttggactgatgtttcaggtgatggatgatgtgctcgat
gagaccaagtcgtccgaggagcttgggaaaactgccggaaaagatttgatcaccggaaag
cttacttatccgaaggtgatgggtgtggagaatgcgagagaatatgcaaagaggttgaat
agagaagcgcaggaacatcttcaggggtttgattctgacaaggtggttcctttgttgtct
ctcgctgattatattgtcaagagacaaaactga
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