Arabidopsis lyrata (lyrate rockcress): 9327579
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Entry
9327579 CDS
T01578
Name
(RefSeq) elongator complex protein 2 isoform X2
KO
K11374
elongator complex protein 2
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9327579
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
9327579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_BBS7
NBCH_WD40
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
9327579
NCBI-ProteinID:
XP_002894196
UniProt:
D7KEY3
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MSLENTKVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAVFCPKTAQILTTLPGHK
ASVNCTHWLPTSKFAFKAKNLDRHYLLSGDSDGIIILWELSALHNNWRHVLQLPLSHKKG
VTCITAYMVSETDAMFASASSDGVVNVWDVSFPSQSSEECKVVCLDSICVDTKAIVTLSL
AELPQNPGRFALALGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPLHSTEET
ANSIMLVSSSQDKVIRIWKLVLVGDVGSWRREITLASYIEGPVFVSGTFTYQISVESVLI
GHEDWVYSVEWQPPVIDSIDGLLVNHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGE
LSHCALGFYGGHWSHNGQSILAHGYGGSFHLWRNVSSSEESENWQMQKVPSGHFAAVTDV
TWARTGEYLLSVSHDQTTRVFSSWKNDEGNEAEDEHWHELARPQVHGHDINCVAMVQGKG
NHRFVSGAEEKVVRVFEAPLSFLKTLNHTCAGGEGSFPEDLQADVQVLGANMSALGLSQK
PIYLHSSSEPLVRNGGGEGLDTFETVPEAAPAELKEPPIEDQLAFHTLWPESHKLYGHGN
ELFSLCCDHKGKLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTL
LLSVSRDRHFSVFSIQRTDNGDVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVK
IWSIENDARIKQILALPQFGSSVTAVAWTGLDHKEKSGCVAVGMESGLIELWNIKIIEKE
EGTTATAALALRLEPFMCHVSAVNRLAWRPTEKCESNQRLLTLTSCGDDNCVRVFNFKF
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagaaaacacaaaagtcgaagcgaagagagtgttcataggagcaggatgcaac
agagtcgtcaataacgtctcttggggagcttctggtcttgtctcctttggtgcccaaaac
gccgttgctgttttctgccctaagactgcccagattcttactactcttccggggcacaaa
gcttctgtgaattgcactcattggttacccacttccaagtttgctttcaaagccaagaat
ttggaccggcattatctgctctcaggtgattcagatggtatcatcatcctctgggaacta
tctgctcttcataacaattggagacatgtgctacaactaccactgtctcacaagaaaggt
gttacttgcatcaccgcttatatggtttctgaaaccgatgcaatgtttgcttctgcttct
tctgatggagttgttaatgtctgggatgtttcttttccgtctcagtccagtgaggaatgt
aaagtggtgtgtctggactctatctgtgttgacactaaagcaattgtaacgctttcatta
gcggaattgcctcaaaatcctggtcgatttgcccttgcgttgggcggattggacaataaa
atcaaactttactgtggagaaagaacaggaaagtttacttctgtttgtgagcttaaaggc
cacacggactggattcgaagtttggacttctcattaccattacactcaacagaagaaaca
gccaatagtattatgcttgtgagttcttcacaggacaaagttattcggatctggaaactt
gtgttagtcggtgatgttggctcgtggcgaagagaaatcactctagcttcctacattgaa
ggcccagtttttgtctcagggacatttacatatcagatttcagttgaatctgttctgatt
ggacatgaagattgggtctattctgtggaatggcaacctccagtcattgattccattgat
gggctgttagttaaccaccaaccgctgagcattttatcagcttcaatggacaaaacaatg
atgatttggcgacctgagaagaaaacgggtgtgtgggtgaacgttgtatgtgttggagag
ctaagtcactgtgctcttggtttctacggtggccattggagccacaatggtcagtcgatt
ctggctcatggatacggcggatcttttcatctctggagaaatgtcagtagcagcgaagag
tctgagaattggcagatgcagaaagttccttcgggtcactttgctgccgtgactgatgtc
acatgggctagaaccggcgagtatttgttatccgtgagccacgatcagaccactcgtgtg
ttctcatcatggaagaatgatgaggggaatgaagcagaggatgagcattggcatgaactg
gctcgtcctcaggttcacgggcatgacattaactgtgtggctatggttcaaggtaaaggc
aaccaccgttttgttagtggagcagaggagaaagttgtcagagtgtttgaggctcctctg
tcgttcttgaagactctgaaccacacttgtgcgggaggagaaggaagcttccctgaggat
ttacaagcagatgtgcaggttcttggagcgaatatgtctgctcttggtttatcacagaaa
cctatctacttgcactcttcgagtgaaccgctggtgagaaatggcggaggagaaggtttg
gatacatttgagacagttccagaggcggctccagcggagttgaaggagcctccgatcgaa
gatcagcttgcgtttcatactttatggccggagtctcataaactctatggtcatggtaat
gaactattttctctctgctgtgaccacaagggaaaacttgttgcttcatcgtgtaaggct
caatctgcatccatggcggagatatggctatgggaggttgggacatggaaagctgttggt
cgtctgcaatctcacagcttgacagtgacacacttggagttctcttatgatgacactcta
ctcttgtctgtctcaagagatcgtcacttctccgttttctcgatccaaaggacagacaat
ggcgatgttagtcacaaactcatggcaaaggttgaagcacacaagaggatcatatgggca
tgttcatggaacccgtttggccaccaatttgcaacttcatcacgtgacaagactgtgaag
atctggtccattgagaatgacgctcgcatcaaacagattcttgccttgcctcagtttggg
agcagtgtcacagctgtggcttggacgggactagaccacaaggagaagagcgggtgcgtg
gcggttgggatggaaagcggactgatagagctgtggaacataaagattatagaaaaagag
gaaggtacgactgcaacagcagctcttgctctgcggctcgaaccattcatgtgtcatgtc
tcggccgtgaaccggttagcttggagaccaactgagaagtgcgagtctaatcagcgcttg
ctaacattaacttcttgtggggatgataattgtgtgagagtttttaacttcaaattttga
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integrated database retrieval system
