KEGG   Arabidopsis lyrata (lyrate rockcress): 9327755
Entry
9327755           CDS       T01578                                 
Name
(RefSeq) coatomer subunit beta'-2
  KO
K17302  coatomer subunit beta'
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9327755
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9327755
Membrane trafficking [BR:aly04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    9327755
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   9327755
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR41 DSE1_N ANAPC4_WD40 ASA1 Beta-prop_IFT140_1st CFAP251_N NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_Aladin PEP5_VPS11_N Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N TRM82_WD Beta-prop_SPT8 Beta-prop_Nup120_160 WD_LRWD1 Clathrin TPR_GEMI5 PH_SPO71
Other DBs
NCBI-GeneID: 9327755
NCBI-ProteinID: XP_020870104
LinkDB
Position
Unknown
AA seq 918 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPV
RSAKFIARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGERLPLSVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFSKNFQ
EKRSIRPTFSAEKIFGGTLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRDLVSSHFDSGRPTEEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS
SWKLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKASEILPTIPKDQHNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQE
IAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
VNSKAAESLADPEEYPNLFEDWQVALSVEARAVETRGVYTGAENYPSHADKSSMTLVEAF
RNLQVEEEESLENGDIDHEEVVAEENGNEQRNEEDVEEHHEEKEAEEEEGIVDGDSTDGA
VLVNGSEADEEWVLTPRQ
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgccgctcagactcgagatcaagagaaaattagctcaaaggtccgagagagttaaatct
gtggatctgcatcctactgaaccatggattctcgcaagtttgtattctggaaccttgtgt
atttggaactaccagacacaggtgatggctaagtcctttgaggtgaccgaattaccagtt
cgttcggccaagtttatagcacgaaagcagtgggttgtggcaggagctgatgatatgtat
atccgtgtatacaattacaataccatggacaaggttaaagtgtttgaggctcattcagac
tacattaggtgtgtggctgttcatccaacccttccatatgtgctgtcatcttctgatgat
atgctcataaagctttgggactgggaaaagggttgggcttgcactcagatattcgaggga
cactcgcactatgtgatgcaagttacatttaatccaaaagacaccaacacttttgccagt
gcatcacttgatcgtaccataaagatttggaatcttggttccccagacccaaattttaca
ttggatgcccatcagaaaggggtgaattgtgtagattatttcactggtggtgataagccc
tatttaattactggctctgatgatcacactgctaaggtctgggactaccaaacaaaaagt
tgtgtccagaccctggaagggcacacacacaatgtatctgcagtatgtttccatccagag
cttccgattataatcacaggttctgaagatggcaccgttcgcatttggcatgcaactaca
tacaggctagagaacacattgaattatggcctcgagagagtctgggcaattggttacatt
aaaagttcacgccgggttgtgatcggatatgatgaaggaaccatcatggttaaacttgga
cgagaaattcctgtcgctagcatggacaataccgggaaaatcatatgggctaagcataat
gaaattcaaactgcaaacatcaaaagtattggtgcagattacgaggttactgatggagag
aggttgcccttgagtgttaaagagttggggacctgtgatctttatccacaaagcttgaag
cacaaccctaatgggaggtttgtcgtagtctgtggtgacggggaatatataatctacacg
gctttggcttggagaaataggtcatttggttctggactggaatttgtttggtcgtccgag
ggggagtgtgcggttagagaaagctcatcaaagattaaaatatttagcaaaaatttccag
gaaaagaggagtatccgccctacgttttcagctgagaagatctttggaggaaccttgtta
gctatgtgttcaagtgatttcatctgcttttatgattgggctgaatgtaggctgattcaa
cgtattgacgtcactgtaaagaatctatattgggctgacagtggtgatttagtagccatt
gctagtgacacatcattctacatcttgaaatacaaccgcgacttagtttcctcacatttt
gatagcggaagacctactgaggaagaaggtgttgaggatgcttttgaggttctccatgaa
aatgatgaacgtgttaggacaggtatatgggttggtgactgtttcatttacaacaactct
tcctggaagcttaactactgtgttggaggcgaggtaaccacaatgtatcatttggaccgc
ccaatgtatttgttgggctatcttgcaagtcaaagtcgggttttcttggtagacaaagaa
ttcaatgttataggatacaccttgctgctaagcctgattgagtacaagactcttgtgatg
cggggtgatttagacaaagccagtgaaatcttacctacaattcctaaagatcagcataac
agtgttgctcatttcttggagtcacggggaatgattgaagatgctctggaaattgcaaca
gatcctgactacagatttgagttggccatacaactgggtagacttgaaattgcacaggaa
atcgccgtggaagtacagagtgaatctaagtggaagcaattaggagagttagccatgtct
tctggaaagctgcaaatggctgaggaatgcatgaagtatgctatggatttgagtggtttg
ttactgctttattcttctctgggagatgctgaaggtgtgacaaaacttgcaacacttgct
aaagaacaagggaagaacaatgtcgcctttctttgcctattcatgctgggtaaactggaa
gattgtttgcagttattggttgagagcaaccggataccagaagctgctctgatggcacga
tcatatcttccgagcaaagtttctgagatagtagctctttggaggaaagatctcagcaag
gttaattcaaaagcagcagaatctttggctgatcctgaggagtacccaaatctttttgaa
gattggcaagtagctctttctgtcgaagctagagctgtagagacaaggggagtttacaca
ggtgcagaaaattatcctagccatgctgataaatcttccatgaccctcgtggaagccttc
agaaacttgcaagttgaggaagaggaatcacttgaaaatggagatatcgatcatgaggag
gtagtagcagaagaaaatggaaatgaacaaaggaatgaggaggatgtagaggagcaccat
gaagaaaaagaagcagaagaagaagaaggaattgttgatggagactctacggatggagct
gtacttgttaacggaagtgaggctgacgaagagtgggtgcttacaccgcgtcagtag

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