Arabidopsis lyrata (lyrate rockcress): 9328134
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Entry
9328134 CDS
T01578
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 10 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9328134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9328134
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
9328134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF1217
Motif
Other DBs
NCBI-GeneID:
9328134
NCBI-ProteinID:
XP_020870173
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MAFSHDNRLRFKDEDRSLSSEYGYGRKARPSLDRVFKNVKWGFKKPLNFRSHKDPDHKET
SSITRKNIINPQDSFLQNWNKIFLFACVVALAIDPLFFYIPIVDGARHCLTLDKKLEIAA
SFLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIAIKYLSSYFIIDVLSIL
PLPQIVVLAVIQSVNQPVSLFTKDYLKYVIIAQYVPRILRMYPLYTEVTRTSGIVTETAW
AGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCDKKFLYCENDRTVSNNF
LTTSCPFIDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNL
QTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRML
PEDLRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQ
LLDAVCDRLKPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASD
FCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQFRRLHSKQLQHT
FRFYSVQWRTWSVSFIQAAWRRYCRRKLAKSLRDEEERLREALANQDKERNAATVSSSLS
LGGALYASRFASNALHNLRHNISNLPPRYTLPLLPQKPTEPDFTANHTTDP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcatttagccatgataatcgtctaaggttcaaagatgaagacagatcattatcctct
gagtatggttatggaagaaaagctagaccttctttagacagagttttcaagaatgtaaag
tggggattcaagaagccattaaatttccgttcacataaggatcctgaccacaaggaaaca
tctagtattactcggaagaacatcataaacccgcaggattcgtttctccagaattggaac
aaaatatttctctttgcttgtgtggttgctttggcgattgatccattgtttttctacatt
cccattgtcgatggcgcaaggcactgtcttactttggacaaaaagttggagatagctgca
agttttcttcggacactcatcgatgccttttacattattcacattgtgtttcagttcagg
acagcttacatcgctccttcttcgcgggtttttggaagaggtgaattggtagatgatgct
aaggctatagctataaagtatctctcatcttacttcatcattgatgtactctctatcctt
cctctcccacagatagtagttttagccgttattcaaagcgtcaaccagccagtctctttg
ttcacaaaagactaccttaaatatgtcataattgctcaatatgttcctcggattctccgt
atgtatccgctttacaccgaagtgaccagaacatctggcattgttactgaaacagcatgg
gctggggctgcttggaacctctctctctatatgttagccagtcatgtatttggagcttta
tggtacttaatctcagtagaacgagaagacagatgctggcaagaggcatgcgagaagaca
aaaggttgtgataagaaatttctctactgtgaaaacgatcgcactgttagcaacaatttc
ctgaccacttcttgcccatttatcgaccctggtgatataacaaactcaaccatcttcaac
tttggcatcttcactgatgctcttaagagtggggtcgttgaatcacatgatttctggaag
aaattcttctactgcttctggtggggtctgcgaaatctgagtgcattgggacagaatctc
caaacaagcaaattcgttggtgaaatcatatttgctatatcaatctgcatatctggacta
gtcttatttgcgctacttatcggcaatatgcagaaatacttggaatcaacaacagttcga
gaggaggaaatgagagtgagaaagagagatgcagagcagtggatgtctcatagaatgtta
cctgaagacctgaggaaacgtatcagaagatatgaacaatatagatggcaagagacaaga
ggagtcgaagaagaaacccttcttcgtaacctccctaaagacctcagaagagacattaaa
cgccatctctgccttgatctcctcaagaaagtacctttgtttgagataatggacgaacag
ttacttgacgcggtttgcgataggctaaaacctgtgctctacacagagaacagttacgtg
atccgtgaaggagatcctgttggagaaatgctgtttgtgatgagaggaagactcgtaagt
gccaccactaatggaggaagaagtgggttcttcaatgccgtgaacctaaaggcaagtgat
ttctgcggagaagatcttctcccgtgggcattagatcctcaatcttcttctcactttccc
atctcgacgagaacagttcaagctctcaccgaagtcgaagcctttgctcttacagctgag
gatctcaagtctgtcgcttcacaattcagacgcctccatagcaagcagctccagcatact
ttcaggttttactcagtgcaatggagaacatggagcgtatcttttatacaagcagcgtgg
cggagatactgtcggaggaagttagccaagtcattacgcgatgaagaagagcgtctccga
gaagcgctggctaatcaagataaagaacgcaatgctgcaactgtgtcttcgtccttgagc
cttggaggtgctctttacgcgtcgcgttttgcttcaaacgcgcttcacaatctgaggcac
aatatatccaaccttcctccccgctacactcttcctttgctacctcaaaaacccaccgag
ccggacttcaccgccaatcacacaactgacccttag
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