Arabidopsis lyrata (lyrate rockcress): 9328204
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Entry
9328204 CDS
T01578
Name
(RefSeq) peroxisome biogenesis protein 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
9328204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9328204
Membrane trafficking [BR:
aly04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
9328204
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
RuvB_N
AAA_lid_3
Rad17
AAA_22
nSTAND3
AAA_33
AAA_17
NPHP3_N
AAA_28
TsaE
AAA_18
RNA_helicase
AAA_7
TIP49
DUF815
AAA_14
Parvo_NS1
ATPase
Mg_chelatase
IstB_IS21
nSTAND_NTPase5
AAA_25
AAA_2
PhoH
AAA_24
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
9328204
NCBI-ProteinID:
XP_020870572
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MVERRNPLVLSSTRSTLRSVLNSLQTSSADGDRVLNHDGIVLGGSDLSRGNVNLSAGILR
WRMDGENVSDAKLDSLDDSALVGLSTQLLKRLSINSGSLVVIKNIEIGIQRVAQVVVLDP
PKTTLEDASVSELPVSDSLHTMLVFPTYDLMAQQLLDQEVAYLSPMVAFNLSLHISCLKS
LVHRGNGVLEKYFEAKFDEEFIGKPAADGLKIGLGLEPVSDVPGYASHLRVSFVKIPECG
TIQSLKVNSSFEAEERQGLIDSALHKYFGTDRQLSRGDIFRIYIDWNCGSSICIPCSQRL
CSESDDYIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEE
TVNILASVLSPPLCPSALASKLRVAVLLHGLPGCGKRTVVNFVARRLGLHVVEYSCHSLL
ASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSSEIASVIRE
LTEPVSNGENSSMEEKPNSNFSEDEVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRM
GSLNDEQRSEMLTQSLQGVSQFLNTSSDDFMKGLVGQTSGFLPRDLRALVADAGANLYIS
QESETKKVNSLSDNLHGVDVHQASQLGNSSDALTAKEDFTKALDRSKKRNASALGAPKVP
NVKWDDVGGLEDVQTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVAT
ECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSG
GVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASY
RERVLKALTRKFKLSEDVSLYSIAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSVEF
PPEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRSS
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggtggagagacggaatcctttggttctatcatccaccagaagcacactccgttcagtg
ctcaattcgttacaaaccagctctgccgatggtgaccgagttctgaatcacgacgggatt
gttttgggcggatccgacttgtcacgagggaacgttaatttgtctgcgggaattctccgg
tggcggatggatggagaaaatgtttccgatgcaaaattggattctttagatgactctgca
ttggttggactctccactcaattgcttaagagactatctatcaattctggttctttggtt
gttatcaagaacattgagataggcattcaacgggttgcgcaagttgttgtacttgatcct
cccaagacgacgctggaagatgcttctgtctctgaattacctgtttcggactctcttcat
accatgcttgtctttcccacttatgatttgatggcccagcagttattagatcaagaggtt
gcttacttgtccccaatggtagcttttaatcttagcttgcatatatcttgcctgaaatcc
ctcgtccaccgagggaacggggtcttagagaagtattttgaagctaagtttgacgaggag
tttatcggaaaacctgcggcagatgggttgaagattggtttgggtttggaacctgtgtct
gatgttccaggctatgcatcacatctgagagtttcttttgttaaaatcccagagtgtggt
accattcaatccctgaaagtcaattcttcatttgaagctgaagaacgacaagggttaata
gattctgcattacataagtattttggaactgatagacagctgtcaagaggcgatatattt
cgcatttacatcgactggaattgtggttcaagcatttgtattccatgtagtcaaaggttg
tgctctgaaagcgacgactatatatattttaaggttatcgcgatggaaccttctaatgag
aggtttcttcgagtcaatcactcccaaaccgcccttgtccttggaggaactgtatcttct
ggtctcccaccagatttgctggtgtatagatcaaaggttcctatgcccttgcaggaggag
acagtaaatattttggcatcagtgctttcaccacctctctgcccatcagcactcgcctca
aaactcagggttgctgttttactgcatggtctgccagggtgcgggaagagaactgttgtt
aactttgttgctaggaggttggggctgcatgtagttgaatatagctgccacagtttatta
gcatcatctgagaggaaaacatctactgctttggcccagacttttaatatggcacgaagg
tattcaccaacgatacttctgcttcgccatttcgatgtttttaaaaatctgggctctcag
gatggttcactgggtgatcgagttggtgtgtcctctgagattgcatccgtgattagggaa
ctcactgagccagtttctaatggtgaaaacagttccatggaagaaaaaccgaatagcaat
ttctctgaagatgaagttgggaagtttaggggacatcaagtgctattaatcgcatctgct
gaaagtacggagggtatctctccaacaattaggcgttgctttagccatgaaatacgtatg
ggttctttgaatgacgaacagagatctgaaatgctgactcagtccctccaaggcgtctct
caattccttaataccagctcagatgactttatgaaaggattggtgggacagacttctggc
ttccttcctcgggacttgcgtgctcttgtagctgatgctggtgccaacttatacatcagt
caagagtccgagaccaagaaagttaactctctgtcagataatcttcatggagttgatgta
caccaggcaagccaattaggtaacagtagtgatgcattaacagctaaggaagactttacc
aaagctttagatcgatcaaagaagagaaatgcatcagcccttggtgctccgaaggttccg
aatgtgaaatgggatgatgttggtgggcttgaagatgtgcagacatcgatattggacaca
gttcaactacctctcctgcataaagatttattttcgtccggattgcgtaaacgttctggt
gtacttctctatggccctccaggaacagggaaaactttactggcaaaagctgtggcgaca
gagtgctccttaaattttctcagtgtaaagggtccagaattaatcaacatgtatattgga
gagtcagagaaaaatgttcgagatatatttgaaaaggcaaggtcagcgcgaccttgtgtg
atcttctttgacgagcttgattctcttgctccagctcgaggtgcttctggtgattcagga
ggagtcatggatcgagtggtctctcagatgcttgcagagattgatggactcagcgactct
tcccaggatctgtttattataggagcaagcaacagacctgacttgattgatccagctctt
ttacggcctggcagattcgacaaacttctatatgttggagtcaatgctgatgcgtcttac
agggaaagggtccttaaagcactaactcggaaattcaagttaagcgaagatgtatctctt
tattcaatagcaaagaagtgtccctctacattcaccggcgctgatatgtacgccttgtgt
gctgatgcttggtttcaggcagctaagcgaaaggtctcaaaatcagattcagtggaattc
cctccagaagatgatccggattcagtcgttgtagagtatgtggattttataaaggcaatg
gatcagctctcaccatcactctccataactgagcttaagaagtatgagatgcttcgagat
caatttcaaggccgttccagctaa
DBGET
integrated database retrieval system
