Arabidopsis lyrata (lyrate rockcress): 9328244
Help
Entry
9328244 CDS
T01578
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9328244
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
9328244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_4
zf-met
LAMTOR5
Motif
Other DBs
NCBI-GeneID:
9328244
NCBI-ProteinID:
XP_002892182
UniProt:
D7KD84
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MTTEDQTISSSGGYVQSSSTTDHVDHHHHEHDSLNPPLVKKKRNLPGNPDPEAEVIALSP
KTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHH
HPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIF
SRRDSFITHRAFCDALAEETARLNAASHLKSLAATAGSNLNYHYLMGTLIPSPSSQPPPS
FPFGPPQPQHHHQHFPIPTTTFDHHHHQDVMKPASSLSLWMGGNINHHQQVTIEDRIAPQ
PHSPNEDYNWVFGNANNRGELITTSDSLITHDHNINIVQSKENTNAATSLSVPSLFSSVD
QITQDANAASANMSATALLQKAAQMGSTSSTSPTTTITTDQSGYLQSFASKISDQSNQIV
EDGGSDKFFALFGSNSVELMSNNNNGLHEIGNPRNGVRVVSGIDELQNYPWKRRRVEIGN
AGGGGGQTRDFLGVGVQAVCHSSSINGWI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaagatcagacaatttcaagtagtggaggatatgtccaaagctcatcaaca
actgatcatgttgatcatcatcatcatgaacatgactcccttaatcctcctcttgtcaag
aagaagagaaacctccctggaaatcctgatccagaagccgaggtcatagctctatcccca
aagacacttatggccacaaatcgattcctatgcgagatatgtggaaaaggttttcaaaga
gaccagaatctacagcttcaccgtcgaggacacaacctcccatggaagctaaagcagagg
acaagcaaagaagtaagaaaacgagtgtatgtgtgtccagaaaagagttgcgtccaccac
catccgacaagggcactcggtgaccttaccggcattaagaaacatttttgtcggaaacat
ggcgagaaaaagtggaagtgtgagaaatgcgccaagagatatgcagtccaatctgattgg
aaggctcattccaagacttgtgggactagagagtatagatgcgactgtggtacaattttc
tcaaggagagacagcttcattacacatagagcattctgtgacgctttagcagaagaaacc
gctaggctaaacgcagcctcacatctcaaaagccttgctgcaaccgctggtagtaatcta
aactatcattatctcatgggcacacttatcccatcaccatcatcacaaccaccaccgtcg
tttccattcggaccaccgcaaccgcaacatcaccaccaacatttccctatcccaaccacc
accttcgatcatcatcatcatcaagacgtcatgaaacctgcgtcttcgctctctttatgg
atgggaggaaatattaaccatcatcagcaagtgacaatcgaggaccgtatcgcaccgcag
ccgcattcaccgaacgaggattacaattgggttttcggaaacgcgaataatcgcggtgag
ctaataacgacgagcgattcactcattacacatgaccataatattaatatcgtccagagt
aaggaaaacacaaacgcggctacttctctttccgtcccttctctttttagcagcgtcgac
caaattacccaagacgcaaacgcggcttctgcaaacatgtcagcgactgcgttacttcaa
aaagcggctcagatgggatcgacttcttctacgtcaccgacgacgacaatcaccaccgac
caatcagggtatcttcagagttttgcgtcgaaaatctccgaccagagtaatcagattgta
gaagatggtggcagcgacaagttcttcgctttgtttggatcgaacagtgtcgagttaatg
agtaataataataacggtcttcatgagatcgggaaccctagaaacggtgttagggtcgtt
tcggggattgatgaattacagaattacccttggaagcgtagaagagttgagattgggaac
gcaggaggaggaggtgggcaaactcgggatttcctaggggttggtgttcaagcagtgtgc
cattcttcctctatcaatggatggatttga
DBGET
integrated database retrieval system