Arabidopsis lyrata (lyrate rockcress): 9328374
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Entry
9328374 CDS
T01578
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI12
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9328374
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
9328374
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
9328374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
IBR_1
UBA_ARI1
Ariadne
IBR_2
zf-C3HC4
Zn_ribbon_RPAB4
ArfGap
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
9328374
NCBI-ProteinID:
XP_020866789
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MDNNSVIKSQGELEIQSEAEAEAYESYVNAALEDGQTTKKSVQRNYATVLTEEDIRALME
IDIRSVSDLTSLSKAEATLLLSHLRWDVDDIREQWSAGAQIVRESVGLLELDPPSDDNEY
FCGACGKSNPHKNFASVSCGHRICTRCWKSHINKIISEKPSAEWNLWLKCPVRVGLHASC
PASVGRDMIEEFASREEKFNYNQYLLRTYVENRETMKWHPIRGSRCAIDLSPDSGNASVS
CLRLVRFCWNCREDAHSPVDCKTAAKWLLENAVPCPTCMQSIPRNQDNSLKMKCLPCNYE
FCWYCRLDWIEHLEGTGGDSYTCNFNAVSSDQSGEMSESDPNRYGDCYEDWSSNELLMQK
AEANLPKLDTAIKDLSNTQLENVSQLKFILEAGLQIIECLRVLKWTYVYGYYLREDEVGK
QNLLKDTQERLKNFVENLNHCLVTNLEPFRYEEEPSKDFKAFRIKLTELTSLTRNHYENV
VKDIENGLASVVSEGEASGSGRNHDD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggataataattccgtaatcaaaagccagggtgagctcgaaatccaatcggaggccgag
gcggaggcgtatgagtcgtatgtcaacgcagctttagaagatggtcagaccacaaaaaaa
tctgtccaacggaattatgcaactgttctgacagaggaagatattcgagcgcttatggaa
attgacattcgaagtgtttcagatcttacttccctctccaaagctgaagccacacttctg
ctttctcacttgagatgggatgttgatgatattcgtgaacaatggtctgctggtgctcag
attgttagagaaagcgtgggcttattagaacttgatccaccttctgatgacaacgagtat
ttttgcggagcctgtggcaaatcaaacccacataagaacttcgcatcggtctcttgtggc
catcgtatatgcactcgctgctggaaaagccacatcaacaaaatcatcagtgaaaagcca
tctgctgaatggaatctttggctgaaatgccctgttcgtgttggtctccacgcttcttgt
ccagcttctgttggtcgagatatgattgaggaatttgcttccagggaagagaagttcaat
tacaatcaatatctccttagaacttacgttgagaacagagagacgatgaaatggcatcct
atccgggggtctagatgcgcgattgatcttagtcctgattctggaaatgccagtgtctcc
tgtctccgtttggttagattctgttggaattgcagagaggatgctcacagccctgtggac
tgtaaaactgctgcaaaatggctactagaaaatgcggtgccttgtcccacgtgtatgcaa
agtatcccacgaaatcaagataattcactgaagatgaaatgcttaccttgtaactacgaa
ttctgttggtactgccgtctcgactggattgaacacctggaaggaactggtggtgattca
tacacttgtaacttcaatgctgtctcgagtgatcaaagtggggaaatgtcagaatctgat
ccaaatagatacggagattgctatgaagattggagcagtaatgaattgttgatgcaaaaa
gcagaagcaaacctgccaaaactagatactgctattaaggatctaagtaacacacagtta
gaaaacgtatcacagcttaagttcatcctagaagctgggcttcagatcatagaatgtcta
agggtcctgaaatggacttatgtttatggatattaccttcgagaggatgaggtcgggaag
caaaatttattgaaggatacgcaagagaggttgaagaattttgtggagaatctaaatcac
tgtttggtgactaatctggagccgtttcgttacgaggaggaaccatcaaaggatttcaaa
gccttccgcatcaagttaactgaactaactagcttaacgcggaaccactatgagaatgtg
gtaaaagatatagagaatggcttagctagcgttgtctctgaaggggaagctagtggttcg
ggccgtaatcatgacgattaa
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